Leucoraja erinacea (little skate): 129714070
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Entry
129714070 CDS
T09122
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1-like isoform X1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
leri
Leucoraja erinacea (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
leri04990
]
129714070
Domain-containing proteins not elsewhere classified [BR:
leri04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
129714070
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
fn3
Ig_2
ig
LRR_5
LRR_9
Sp38
DUF4083
Motif
Other DBs
NCBI-GeneID:
129714070
NCBI-ProteinID:
XP_055519503
LinkDB
All DBs
Position
38:complement(389991..479492)
Genome browser
AA seq
751 aa
AA seq
DB search
MMERFLLSLLLLSLAVRTQLCPKRCICQNLSPSLAILCAKTGLLFVPPFIDRRTVELRLT
DNFITTVRRKDFANMTSLVHLTLSRNTISQIMPLTFGDLRGLRALHLDSNRLTRLVNEHL
KGLVNLRHLILNNNQLHHISEGSFNDFLSCLEDLDMSYNNLERFPWEAISKMINLNTLAL
DHNLISHIEEGTFSILHKLARLDMTSNRLHKLPPDPLFLRTQLLINAKGIPYFSLTLSFG
GNPLHCNCELLWLRRLTRKDDLETCASPPQLMGKYFWSISEEDFTCDPPLITHLTATKAF
VVEGQGVTLKCKAIGDPDPSILWSSPEGKLVSNSSRTIIYSNGTLDILITTLKDSGMFTC
IASNAAGEIATNVTIGIIPLPHLVNFTKERKKPAPGSSDITTSTKTGSPSNGSDAKSSHD
RKVVATDLSTTSALIRWPSLHPIPGIRMYQIQYNSSTDNTLVYRMIPSTSKTFLVNDLTP
GRDYDLCILAVYDDGMTMMTGTRVVGCVQFTTDQEYTQCQSVHAQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVHNSSADSKTKVSNVCSQTNSSHSAAMARSTSKLASTAQGECTHE
VFAECSKGSVAVLVNMSGEKGGLPHSTMVTAIDQRRTKTSVDLQAEAQLSCEEAPPAGST
TNTSLSVCLVSQRRRQQPHTVSVLPCDLSRARHRHSFDGDYSLFQSHSYPRRARTKASLT
GSGHNLNSDDLGVESKRATYGSKEWMLESTV
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgatggagagattcctcttgtctctgctgttgctcagcctggcggtcaggactcaactc
tgccccaaacgctgcatctgccagaacctctcaccgtccctggccatcctctgtgccaaa
accgggctgctcttcgtgcccccgttcatcgaccggagaacagtggagctgaggctcacc
gacaacttcatcaccaccgtcaggaggaaggactttgccaacatgaccagcctggtgcac
ctcaccctgtctaggaacaccatcagccagatcatgccgctgacctttggtgatctgcgt
ggcctccgggccttgcatctggacagcaacaggttgaccaggctggtgaacgaacatctg
aagggcttggtcaacctccgacatctcatcctcaacaacaaccaactccaccacatctct
gagggatcgttcaatgacttcctcagctgcttggaggacttggacatgtcctacaataac
ctggagcgtttcccatgggaggccatctccaagatgatcaacctcaacaccttggccttg
gaccacaacctgatcagccacatagaggaagggaccttctccatccttcacaaattggca
cgcttggacatgacctccaacaggttgcacaagcttcctccagatccactgttcttaagg
actcagctgctgatcaatgccaagggtattccatacttctcgttgaccctcagctttggg
gggaaccctcttcactgtaactgtgagctcctctggcttcgaaggttgacaaggaaagat
gatctggagacctgtgcatccccacctcaactgatgggcaaatatttctggtccatctca
gaggaggacttcacctgcgaccctccgctcatcactcacctgacggccaccaaggccttt
gtggtggagggccagggggtgacactcaagtgcaaggccattggcgatccagacccgtcc
attctctggagctcaccagaaggcaagctggtgtccaactcctcgagaacaatcatctac
agcaacggcacactggacattctcatcaccaccctgaaagacagcggcatgttcacctgt
atcgcctccaatgcagcgggagagatagccaccaacgtgaccattggaatcatccccctg
cctcacctggtcaacttcaccaaggaacggaagaagccggcaccaggctcgtcggacatc
accacctccaccaagactgggtccccgtccaacggcagcgatgccaagagctcacacgac
aggaaggtggtggccacggacctcagcaccacttcagccctcatccgctggccctctcta
catcccatccctggcatccgcatgtaccagatccagtacaacagctccacagacaacacc
ctggtgtacagaatgattccatccacaagcaagactttcctggtgaatgacctgaccccg
gggagagactacgacctgtgtatcctagctgtgtacgatgatggcatgacaatgatgact
ggcaccagggtggtgggctgtgttcagttcaccactgatcaggaatacacgcagtgccag
tctgtgcacgcccagttccttggtgggaccatgatcatcatcatcgggggaatcatcgtg
gcctctgtcctggttttcatcatcatcctgatgatcaggtacaaggtacacaacagctca
gccgacagcaagaccaaggtcagcaacgtttgctcccagaccaacagcagccattcagca
gcgatggccaggtctacgtccaagctggcctccaccgcgcaaggtgagtgtacgcacgag
gtgtttgctgaatgttccaagggctcggtggcagtgctggtaaatatgtccggggagaag
ggtggtcttccccacagcaccatggtaacggccatagaccagaggaggacaaagaccagc
gtggacctccaggcagaggctcagctgtcttgtgaagaggccccaccagcagggagtacc
accaacaccagcctgtcagtctgcttggtgagccagcgccgaaggcagcaaccgcacacc
gtttctgttctgccttgcgatctgtcgagagcccgacatagacactcgtttgacggagac
tattctctgttccagagccacagctatccccggagagctcggactaaggcaagcctgacg
ggcagtggccacaacttgaactctgatgacttgggtgtggagagcaagcgggcaacgtac
ggcagcaaggagtggatgttggagagcacggtgtga
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