Leucoraja erinaceus (little skate): 129714077
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Entry
129714077 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: BRD4-interacting chromatin-remodeling complex-associated protein-like
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129714077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129714077
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
129714077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
GtgE
Motif
Other DBs
NCBI-GeneID:
129714077
NCBI-ProteinID:
XP_055519517
LinkDB
All DBs
Position
38:715794..769259
Genome browser
AA seq
1627 aa
AA seq
DB search
MMSAHAVDMDDEDGRCLLDVICDPQALNDFLHGSDQLDGEDLLDTNADPASAFFTDASLN
VQDASVNHMNSGQPPSSSSAVDLDFLEDDILGPSSASNLPGSAEPCDILQQSLQEANITE
QSLEDDAGLDIGSLHFSSLQPVSQGAEAAHLFAGSTELMGLQQQPSAVLAQQTLIQQQTI
AGQVVNKAINIQPFLQQVGLGNVTLQPVSNIQGLPNGSPSGTLGIGQIQVVGQLSSQPVM
AQQIIGKAGQPTVTTVPGVSYISSPASEQQVSAVSPTNASLVLQKNAGPNALNGNSLFAG
QAGVRPASGPTLMQAQLAGPNVIVQRTPTPIQPKPSASLVQHKLFQISSKPFCPSSAALS
LQADAPLQQSQAPQQKAQPNVAFMAGKPGQNVVFSASGPGFSSGVFKPQQAPPQAFGKPL
SLQLQGGSIVIQPQHMHQAMLQGQNQFLLQGQLTGGQLSQQLSALAPGVGGQILTAQPTG
PSPNTTHIITNQGLPAQILTNQGLAGQINLGQVIAQNAHGATHILSGPIQLQAGPVGPST
VFQMPVSLAGGLGPQGTGSGTGSAVIQGVAMPGQPTVLGAGVGEAQAQAGNSATTTSLVA
LGNGQGSLLTVQSSGPPLTPGTQAGSTSTAPTGKIVVAPSGPAAAQDTTQVFFQQQEQRQ
QQLYQAALKLQQERGLNQPPHSLAPTITTSSVPASVIVSSSLGLASGPIPDAKGHAPLPT
LPVTHFQHTLPGQMAAGQQKTPTSQSPAPQATGSDGQLHIQMSSPHQSRPPSQPQPLSRP
PSRPQSRPSSQPQPLSRPPSEPLSRSCTPSQLPLQPLYVIQTQLQSPPQPTHPMRPPSQP
HLQMQFQNAVAPPQVTPPPSHSQAEAQTPPHLQPPSQPLTEGPPPQAHVQLQLHCSPHPQ
PPLQPVYQTVTLTAEQQQRFQMVTSQLQTMATHPNPRPQPKTMMEKLQQMQHSIILQAKP
GSGQTGPGPTPLTSTPPTMLLSGQGQSPGPQPHPIPTTSTPTGLKPLPQGAGQAALASLL
QQSSVLIKTTAGTTATTRSTDSKVIAGPNSASAGHLQQGAAVPLQIKPLVQHQMQPSLQT
KTGVISSISGLNMSLSKGPIQIQLLGKGLTQLVPAGTVSAHQMESKLGSLKTSLTPQPPK
ESMLLERLRGDQDGVLQPNCKSPFRTHHDTLSRLLPYHLYQGTLPSVDEHRKVDEEFEAV
STQLLKRTQAMLHKYRMLLFEEARRLSPSAEMVMIDRMFIQEEKTSLSTDRQLAKDKPDE
YVASSSRCHSLPTSSSPPSSCSSLQEPLRLPLVASSTPVHGTKLVIKQSGGSPCVSWARV
GGGPEGGEDDTLHTRSRPPPMKTYEARSRIGLKLKIKQEAGLSKVVHNTALDPVHQPVSS
VIRSTECPVVSATARQLNGGLDHHASPSPTDPHPHPPTAQCKLPPRKSLREAPPSGRSAA
DPPASSGQPDDGRKDGRRDVPAKCEATPAGPRQRTGRGRAEGGGRKTRTHAHPPPTRCEE
PPGSKEGEGGLRAAPEELVRGIIKAEPTDGSWELALPPPKRTKCESFDMDNASFSSDSPQ
DDTLTEHLQSAIDSILNLRQPQSSLAPPVSSPYHASDISSPFSPTTHSDTYLAPNRNGGL
GARTYTR
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggctcatgcagttgacatggatgatgaagatgggcgttgtctcctagatgta
atctgtgaccctcaggccctcaatgacttcctgcacggttcagaccagcttgacggtgag
gatctcctggacacgaacgctgatccagccagtgctttcttcaccgatgcctcgctcaat
gtacaggatgcatcggtgaaccacatgaacagtggccagcctcccagctccagcagcgct
gttgacctggacttcctggaggatgatatcctgggtccgagctcggcctcgaacctgccc
ggctcagcagaaccatgtgacattcttcagcagagcctgcaagaggccaacatcaccgag
cagtcactggaggatgatgcggggctggacattgggtcgctgcatttctcctcgttgcag
ccagtgtcgcagggggctgaggcggctcatctgtttgctggcagcacggagctgatgggg
ctgcaacaacagccgtccgcagtgctggcacagcagaccctgatccagcagcaaaccatc
gctggccaggtggtgaacaaggctattaacatccagcctttcctgcagcaggtgggactg
ggcaacgtcacccttcagcctgtgtccaacatccagggtctgcccaacgggagcccctcc
ggcacgctgggcatcggccagatccaggtggtcggtcagttgtccagccagccggtcatg
gcccagcagatcatcggcaaggctgggcaacccacggtgaccacagtgccgggagtcagt
tacatctcctcacccgcatctgagcagcaagtgtccgcggtgtcacccaccaacgccagc
ctggtgctgcagaagaatgccggtcccaacgcgctcaacggcaactctctgtttgcaggg
caggcgggggtgcgtcccgcatctggccccacactcatgcaggcacagctggctggcccc
aacgtcattgtccagcgcaccccaacacccattcagcccaagcccagtgccagcttagtg
cagcacaaactcttccagatcagctccaagcccttctgcccgtcctccgcagccctgtcc
ctgcaggccgatgctccactgcagcagtcgcaggctccccagcagaaagcccagcctaac
gtcgcattcatggccggcaaaccgggccagaacgtggtattctctgcctcggggcccggc
ttctcctcgggggtgttcaagccacagcaagcccccccgcaagccttcggcaagccgctg
agcctgcagctgcaagggggcagcatcgtcatacaaccacagcacatgcaccaggccatg
ctgcaaggccagaatcagttcctgttgcaggggcagctgacgggcggacaactctcccag
cagctgtctgctctggcacccggggtgggggggcaaatcctcacagctcagcccacgggc
ccctcacccaacaccactcacatcatcaccaaccaggggctacctgcacagatcctcacc
aaccagggcctagctgggcaaatcaacctgggccaagtgattgcccagaatgcccacggg
gccacgcacattctatctggccccatccagctgcaggcagggcctgtggggccctccacc
gtcttccagatgcctgtctcgctggctggcggcctggggccgcagggcaccgggtcaggg
accgggtctgctgtcatccagggagtggccatgcctggtcagcccaccgtgctgggggcc
ggagtaggcgaggcccaggctcaggctgggaattccgcaaccaccaccagccttgtagcc
ctgggcaacgggcagggctcactgctgaccgtgcagagctctggccctccactgaccccg
gggacccaggccggcagcaccagcactgcacccaccggcaagatcgtggtggccccgtcg
gggccagcagccgctcaggacaccacacaggtcttcttccagcagcaggaacagaggcag
cagcagctttaccaggcagctctgaaactgcagcaggagcgaggattgaaccagccgccc
cacagcctagcccccaccatcaccaccagcagcgtgcccgcctctgtcatcgtcagcagc
agcctgggcctggcatccggccccatccccgatgccaagggacacgcaccactgcccaca
ctgcccgtcacacatttccagcacaccctgcctggtcagatggctgcagggcagcagaag
acgccaacatcgcaatctcctgccccccaggctacagggagcgacgggcagctccacatc
cagatgtcatctccccatcagtcgcgccccccttcccaaccccagcccttgtcccgcccc
ccctcccggccccagtcccgcccctcctcccagccgcagcccctgtcccgccccccctcc
gagcccctatcccgctcctgcaccccgtctcagctgcccctgcaacccctctacgtcatc
cagacccagttgcagtctccccctcaacccacccaccccatgcgccccccctcgcagcca
cacctgcagatgcagttccagaacgctgtagcccctccccaggtgaccccccctccctcc
cacagccaagccgaggcccagacccctccccacctccagcccccctcgcagcccctcacc
gagggccccccaccccaggcacacgtgcagctgcagctgcattgctccccacacccacag
cctcccttgcagcccgtctatcagacggtcactctgaccgccgagcagcagcagaggttc
cagatggtgaccagtcagttacagaccatggccacacaccccaacccccgtccccagccc
aagaccatgatggagaagctgcaacagatgcaacacagcatcatcctacaggccaagccg
ggcagtgggcagactggcccaggccctacgccactgaccagcactccgcccaccatgctg
ctctccgggcaggggcagtcgcccggaccccagccccaccccattcccaccacctccacc
cccaccggcctgaagcccctgccccagggagcgggtcaggctgctcttgcctccctcctg
cagcaaagctccgtcctcatcaagaccacggcaggtaccacggccacaacccgctctacg
gacagtaaggtcatcgcggggccaaactcagcatctgccggtcacctgcagcaaggagca
gctgtgccgttgcagattaaacctcttgtgcagcaccagatgcagccctcgctgcagacc
aagacgggggtgatcagttcaatctcaggtctgaacatgagcctgtccaaagggccgatc
cagatccagctcctggggaaaggattgacgcagctggtgcccgcaggaactgtgagtgcc
caccagatggagagtaaactgggaagtttgaagacatccttgacgcctcagcccccgaag
gagtccatgctgttggagcgactacgtggagatcaggatggcgtgctacaacccaactgc
aagtctccatttcggactcaccacgacacgttgagccggctgctgccctaccacctgtac
cagggaacgctgccctctgtggacgaacacaggaaagtggacgaggagtttgaagccgtc
tcgacacagttactgaagcggacacaggccatgctacacaagtaccgaatgctgctgttt
gaggaggccaggcggctgagtccctcggcagagatggtgatgattgacaggatgttcatc
caggaagagaaaacctccctctccacggacagacaactggccaaagacaaaccagatgag
tatgtggcctcgtcgtcacggtgccacagcctgcccacctcgtcttcgccgccatcctcc
tgctcgtcgctgcaggagccgctgcggctgccgttggtagcgagctcgacgccggtccac
gggaccaagctggtgatcaagcagtcgggagggtctccgtgtgtgtcgtgggcacgtgtg
ggaggtgggccggaggggggagaggacgacaccttgcacacacgcagccgcccgcctccc
atgaagacatacgaggctcgcagtcgtattggtctaaagctgaagattaagcaggaggcg
ggtctgagcaaggtggtgcacaacacggcactcgacccagtacaccaaccggtcagctcg
gtcatccgcagcaccgagtgtccggtggtcagtgccactgcccggcagctcaacgggggc
ctggaccaccacgcctctccctcgcccaccgatccccacccccacccccccacagcccaa
tgcaagctgccgcccaggaagagcctacgcgaggcaccgcccagcggtcgcagtgccgct
gaccctccggccagctccggccaaccggacgacgggcgcaaggacggacgcagggacgtg
ccggccaagtgtgaggccactcccgccggccccaggcagaggacaggcaggggcagggcg
gagggagggggcaggaaaactcggacacatgctcaccccccacctacccgttgcgaggag
ccccctgggagcaaggagggcgagggggggctgcgggcagcgccggaggagctggtgaga
ggcatcattaaggccgagcccaccgacggctcttgggaactggccctgccccctccaaag
aggaccaaatgcgagtcgttcgacatggacaacgctagcttctccagcgatagcccccag
gacgacacgttgacagaacacttgcagagcgccatcgatagcatcctcaatctccggcaa
ccccagtcatccctggctccccctgtctcctcaccctaccacgcctccgacattagctcg
cccttctccccaaccacacactcggacacctaccttgcacccaatcgtaacggtggcctt
ggagctaggacttacaccagatga
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integrated database retrieval system
