Leucoraja erinaceus (little skate): 129714108
Help
Entry
129714108 CDS
T09122
Name
(RefSeq) transcription factor RelB-like
KO
K09253
transcription factor RelB
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04010
MAPK signaling pathway
leri04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129714108
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
129714108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129714108
Transcription factors [BR:
leri03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
129714108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
129714108
NCBI-ProteinID:
XP_055519561
LinkDB
All DBs
Position
38:2192541..2219117
Genome browser
AA seq
491 aa
AA seq
DB search
MKSRKQEQLPGPLCPPGPSPFLQAEQNFDLNVLNDYIMKDLEDLQPTQPCDFNDVHIGEI
RNQLMDQVPSWACNITDLLPTSTGSPLLVARGTGSPQLVARGPGPTQMPPRGGLGPSQLV
SRGPGAPQTGSRGAEVKHHGSGRGARSRAPLRPEPRCFPVLGPGGVAEDPAPKLVITEQP
KQRGMRFRYECEGRSAGSIPGENTTEINKTLPTAQIQNWHGEVKMVISLVTKDAPYKPHP
HSLVGKDCQNGICEVTVSPKCNMKACFANLGIQCVKKKETTRAVEHRLKIGIDPFNVGDS
LNYLEDIDMNVVRLCFQAFIQDPYIALTPVLSDPIYDKKATNTSELRICRLNKDCGVCTG
GEELFLLCDKVQKEDIAVVFSGDSWEARGVFSQTDVHRQIAIVFKTPPYCDIDIQQPVLV
SLRLYRPSDKEYSDPFEFRYTPKDIDYYGIHQKWKRKIKFPPISTFIDANMTLPETATGP
KKSNALSSGGE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaggaaacaagagcagctcccggggccgctatgccccccaggtcccagtccg
tttctacaagctgagcagaattttgatctgaacgtgttgaacgactatatcatgaaggac
cttgaggaccttcagcccacacagccatgtgacttcaacgatgtacatattggggagatt
aggaaccaactaatggaccaagtacccagttgggcctgcaacatcaccgatctgctgccc
acctccacaggctcccctctgctggtcgccaggggcacggggtccccccagctggtcgct
aggggcccggggcccacccagatgccccccaggggaggcctggggcccagccagctggtc
agccgtggcccgggggccccacaaacgggttccaggggagcggaggtgaagcaccacggg
tcaggccggggcgccaggagcagggccccgttgcgcccggagccacgctgcttccccgtg
ctgggccccggtggcgttgccgaggacccggccccaaagctggtcatcaccgagcagccc
aagcagcgcggcatgaggttccgctacgagtgcgagggccgctcagccggcagcatcccc
ggcgagaacaccaccgagatcaacaagaccctccccaccgcgcagatccagaactggcat
ggggaggtcaagatggtcatctccctggtgaccaaggatgccccgtacaagcctcacccc
cacagtctggtgggcaaggactgccagaacggcatctgtgaagttaccgttagtcccaaa
tgcaacatgaaggcttgtttcgctaaccttggcattcagtgcgtgaagaagaaagaaacg
accagagctgtcgaacacaggttgaaaatcgggattgacccgttcaacgttggagattct
ctcaactacctggaggacattgacatgaacgtggtgcgtctctgctttcaggcctttatc
caggacccctacatcgcactgacccccgtgctctcagatcccatctacgacaagaaagcc
accaacacgtccgagctgcgtatctgccggctgaacaaggactgcggagtttgcacgggc
ggtgaagagctcttcctcctgtgtgataaggtgcagaaagaggacattgctgtcgtcttc
tccggcgatagctgggaggcgcgcggcgtcttttcccagacggacgtccaccgtcaaatc
gccatcgtgttcaagacaccgccgtactgtgacatcgacatccagcagccggtgttggtg
agcctgcggctgtatcgaccctccgacaaggagtacagtgaccccttcgagttccgctac
acccccaaggacatcgattactatggtattcaccagaagtggaaacggaagatcaagttc
cctccgatcagcacatttattgacgctaacatgactttaccggaaacagcaacgggaccg
aaaaaatccaatgccttatcgagcggtggagagtga
DBGET
integrated database retrieval system