Leucoraja erinaceus (little skate): 129714139
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Entry
129714139 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 5-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03040
Spliceosome
leri05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129714139
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129714139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
leri03041
]
129714139
Spliceosome [BR:
leri03041
]
Common components
Common spliceosomal components
SR proteins
129714139
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
SET_assoc
OB_RNB
Motif
Other DBs
NCBI-GeneID:
129714139
NCBI-ProteinID:
XP_055519603
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All DBs
Position
38:3193060..3206790
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AA seq
285 aa
AA seq
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MNGCRVFIGRLSPQVRDRDIEKFFKGYGRIREIDLKRGFGFVEFDDARDADDAVYELNGK
ELFHERITVELAKAPPRRGGGRFGGRFNYYRPRSERSSGLRYGPPVRTDYRLIVKNLSSR
VSWQDLKDIMRQAGEVTFTDAHRIHNNEGIVEFASYTDLKNAIDKLDGKEISGRRVQLIE
EPRRHRSWTRSRSRSSSRSRSYKGSRSVSRSASRSLSRSRSRSSRSRSPARDAKRQRDES
RTPSRSPEVKHRRKPSQSRSRLNSPGKSPRSWSGSREQSPVNSAE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaatggttgccgagtgttcatcggtcgcctgagccctcaggtgagggaccgcgacatt
gaaaaattcttcaaaggttacggacgcattcgtgaaattgacctgaagagaggctttgga
tttgtggaatttgacgatgcacgggatgctgacgatgctgtttatgagctgaatggcaag
gagctgttccatgagcggatcacggtggaactggcaaaggcaccaccccggagaggaggg
ggccgatttggtgggagatttaattactatcgccccagaagtgaacgaagcagtggacta
agatatgggcctcctgttcgcactgactaccggctgattgtaaagaatctctcttcccgt
gttagttggcaggatctgaaagacatcatgcggcaggctggtgaagtgaccttcactgat
gctcatagaatccacaataatgaaggcattgtggagtttgcttcttacactgatttgaaa
aatgccattgacaaactggatgggaaagagatcagtgggcgaagggtccaactgatcgag
gagcctcgccgccacaggtcttggaccagatctcgttctcgaagctcttcgcgatcccgc
agctacaagggctccagaagcgtttcgaggtctgccagccgttcgctgagccgcagccgg
tctcgctcctcccgcagcaggtcgcctgcccgtgacgccaagcggcagcgggacgaatcc
cgcaccccaagccgctcgccagaggtcaagcatcgcaggaagccatcccagtcgaggtcg
cggttgaattcccctggtaaatcgccacgttcctggtcgggctcccgggagcaatcccct
gtcaacagtgcagagtaa
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