Leucoraja erinaceus (little skate): 129714162
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Entry
129714162 CDS
T09122
Name
(RefSeq) neuronal PAS domain-containing protein 3-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129714162
Transcription factors [BR:
leri03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
129714162
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
129714162
NCBI-ProteinID:
XP_055519638
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All DBs
Position
38:4448899..4692704
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AA seq
801 aa
AA seq
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MLKMATQYNNELKCVSVEWDFLQGLLVKNQPVPCLQALRKEKSRNAARFRRGKENFEFYE
LAKMLPLPGAITSQLDKASIIRLTISYLRMRDFVNLGDPPWNLRSEGPPPNISIKAIGTQ
QRRSPTSLAIELFELHVGGHILQSLDGFIFALNREGKFLYISETVSIYLGLSQVELTGSS
VFDYIHPGDHVEVAEQLGLKLAGSRGQSTQAPTEDGASSTSSSSLAETPEPDSASPSLLS
EETTMERTFFVRMKSTLTKRGVHIKSSGYKVIHVTGRLRPRLSLPHTRAVPTRFMGMVAL
AHTLPPSTINEVRIECHMFVSRVSLDLQIIYCENRISDYMDLCTADVVGKNCYHFIHAED
VEGIRHSHLDLLNKGQVVTKYYRWMQKNGGYMWVQSSATISINVKNGNEKNIIWVNHVLS
KQELRDTPMDISQLPLLSIKPSKQLELSDSESDSREHIGGCMPKALGKAAGLGAAGEARL
EGWKRSGNQSEEEMTSAKDDSDSSLSDSDGPSGVGRRSFVLSRVKRLKVEAQALGEGREQ
RGSGPSEDGTGSSEEEAAKHQYPKRRKRPRDGSGPRRKTPSPGLGPHDFGGPRTSSERVP
TPKVKTEAIQPVGFDGHGAVWNYPRGDMAYRQAKASASEHFHPDPAHTPPAAADAQKTPF
GQSPRGAPGASSSDALSPPPPPAVVAADDKAEIQAQVSALPSSLYAASTIRYAPADVALS
VPGNLLPATHALNFVDLNGPAFAAEQKAQVEMIYHHVQRLNMAANPFAAAGLPQAFTTAE
ALFSTLPFPIHAPQTLDRKED
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagatggcaacccaatacaacaatgaactgaaatgtgttagcgtagagtgggac
ttcctccaaggactgctcgtaaagaaccaacctgtcccttgcctgcaagccctacggaag
gagaagtctcgcaatgcggcccgattcaggcggggcaaggagaactttgagttttacgag
ttggcgaagatgctgcccttgccaggggccatcaccagccaactggacaaagcatccatc
atccggctgaccatcagctacctacgcatgcgggactttgtcaacctgggggaccccccg
tggaacctgcggagcgagggacccccacccaacatatccattaaagcaataggaactcag
caacgaagaagtcccacgtctctggctattgagctctttgagctacatgtgggtggacac
atcctacagtccctggatggttttatttttgcactaaaccgggaaggaaaatttttgtac
atttccgagactgtgtccatctatctaggcttgtcacaggtggaactaacaggcagcagc
gtcttcgactacatccaccctggggaccatgtagaggtggcggaacagctggggctgaag
ttggctggtagccgcgggcaaagcacgcaagcccccaccgaagatggggccagctccacc
tcttcctcctcgctggccgagacccccgagccagactctgccagccccagcctcctgtct
gaagagacaacaatggaacgaacgttctttgtccgcatgaagtctacactcaccaagcgg
ggcgtgcacatcaagtcttcaggatacaaggtaatccacgtgacgggtcgcttgaggccg
cggttatcgctgccccacacgcgggccgttcccaccaggtttatggggatggtggcccta
gcgcacaccctccctccctccaccatcaacgaggtccgtatcgaatgtcacatgttcgtg
tccagggtcagccttgacctgcagatcatctactgtgagaacaggatctcggattacatg
gacctgtgtacggcagatgtggtggggaagaactgctaccacttcatccacgctgaggac
gttgaagggatcaggcacagccacctggacttgttaaacaagggccaggtggtcactaag
tattaccgctggatgcagaagaatggaggttacatgtgggtccaatccagtgccactatc
tccatcaacgtcaaaaacggcaatgagaagaacatcatctgggtgaaccatgtgttgagc
aaacaagagcttcgagacacaccaatggacatctcgcaacttccactcttgtccatcaaa
ccttctaaacagctggaattatcggattcagagtctgactcccgggaacacataggaggc
tgcatgccgaaggccctggggaaggccgcaggcctgggggcggctggtgaggcccggttg
gagggctggaagcgatcggggaaccagtctgaggaggagatgacatcagccaaggacgac
agtgactcgagcctgtcggatagcgatgggccaagcggtgtgggaagacggagctttgtc
ctgtcacgggtcaagcggctgaaagtggaggcccaggccctgggcgaaggccgtgagcag
cgaggctccgggcctagcgaggacggcactggcagctcggaggaggaggctgcaaagcac
cagtaccccaagaggaggaagaggccgagagacggctcgggccccaggaggaagaccccc
agcccgggcctggggccgcacgacttcggagggccccggacctcgtccgagcgagtcccc
acccccaaggtcaagactgaggccattcagcccgtcggcttcgacggccacggtgccgtc
tggaactacccgaggggggacatggcctaccggcaggccaaagcctcggcctccgagcac
tttcaccccgaccctgcccacaccccgcccgcagctgccgacgctcagaagactccgttc
ggccagtcgccccgcggggcaccgggcgcttcgtcctccgacgcgctctctcccccccct
ccgccggccgttgttgccgccgacgacaaggccgagatccaggcccaggtgtccgccctg
ccctccagcttgtacgcggccagcaccatccgctacgctccggccgacgtggccttgtcc
gtgcccgggaacctcctgcccgccacgcacgccctcaacttcgtcgacctcaacggcccg
gccttcgccgctgagcagaaggcccaagtcgagatgatttaccaccacgtccaacgcctc
aacatggcggccaaccccttcgccgcggctggcctgccccaggccttcaccacagccgag
gccctcttctccaccctgcccttccccatccacgccccccagacactcgaccgcaaggaa
gactga
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