Leucoraja erinaceus (little skate): 129714175
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Entry
129714175 CDS
T09122
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04517
IgSF CAM signaling
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129714175
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129714175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129714175
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129714175
Intermediate filaments
Intermediate filament-binding proteins
129714175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PHA_gran_rgn
DUF3829_2nd
PH_11
Motif
Other DBs
NCBI-GeneID:
129714175
NCBI-ProteinID:
XP_055519657
LinkDB
All DBs
Position
38:5392790..5468867
Genome browser
AA seq
2453 aa
AA seq
DB search
MSSTTTTDLDNMDIQRQYNINSCRETSESYREEENSSSKLFESSRIKALADERDAVQKKT
FTKWVNSHLARALCQITDLYVDLRDGCVLTKLLEVLSGEQLPKPTRGRMRIHSLENVDKA
LQFLKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDAL
LLWCQMKTAGYPGVNIQNFTSSWKDGLAFNALIHRHRQDLVDYSKLQKSNSTFNLQQAFN
AAEQRLGVAKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALAVEGKRIGKVLDNALE
TEHVIARYESLATELLEWIARTITLISNQRFANSLAGVQQQLQVFTTYCTVEKPFKFDEK
GKLEVLLFTIQSKLRANNQQLYQAPEGRLISDVNRAWGKLEKAEHEREGALRKELIRQEK
LEQLAHRFDHKAAMREAWLTENQRLISQDNFGYDLPAVEAAMKKHEAIEADVSSYKERVQ
VITELARELEAEGYYDIKRISAQRDNILRLWTFLQEMLAARRSRLELNLSLQKIFQEMVH
MIDWMEGMQVQLCAKELGKHLLEVEDLLQKHSLLEADISLQSERLKALNAAALEFTQIEG
YQPCDPQVISNRVQHVDSCVAELQRLAGNRRASLEGSRCLWAFLQEIEEAESWIQEKQRV
ISSPHLGKDVSSVTLLLAKQRALAGELGGRCGLLTQTITKGEQILAERHFGTGNIQERIL
EVRVQWKKLDELSALRLQHLQEALSFFQLKADMDDLEVWLQDVYRIVSSDDFGHDEYSSQ
SLAKKHRSLEEDIGQQRPLVEGLGGQADGLAPGYRELEEVRGRVAEVEALYREVREVAGL
RRQWLQDALAVYRMFSEVNACERWIDEKEQWLLRMEIPENLEDLELVQQRFESLEQEMNS
MLSRVVEVNEVVQQLVENGHPSATEVMSCQDHLNSRWGQILRLVKNKKDTMNSLLCVQSY
LLECQEIKCQIREKRKAIESTQGLVNDFGGVIALQRKLSTMEGALTVIEPKLIGLQLEAE
ALASAHPGQAMDILVQFEEISEEWEQLKRALQGCEDSLSVAGKLQQFIQDLDSFLSWLAR
TQGAALSEELPGSLGEAEALLRQHEALQEEMGRREEDYRRILAVREPLALGQAELPLSSI
QQWLGKLELGWEKMQQVWTRRQEALLQAHVYHLFLRDVRQAEAFLNSQESKLAQLELPAS
VAGAEAAIKKHRDFLVTMEINLQKINTVVDAGEHLVKGGNIYMDKIKDQTESIITRSQCN
YKLAHEWLVHLSDEWELQRFLQSCHELGEWINEKMLTVQNTSHDDAQKLHKKWLKHQAFM
AELLLNREWLDKIEKEGQELIKEKPELAAVVRRKLQEIHECWTVLESTTQEKARHLFDVN
RAEQLVQTYSELDRRLSQLEGQLQVGDGGRDIATVNTQLQKLQVLENQMEGWYKEVGELQ
AQAATLQQQSSGKDQVMEKQNVVETRIVRLIEPLKQRRRILLATKEVHQITRDMEDEMLW
VEERLPLAQSKDHGVNLQTVQLLLKKLQTLQREVQGHHPRIGDVMERAGHIASIQQTPEA
DTVRVGLERLRELWGALLEEAEGRQQRLLAMQRAQQYYFDAGEVESWLSEQELHMMTDEK
GKDEQSSLQLLKKHLGLEQTIDDYAENICELSKTCRALLDEGHPESEQISKQQSQIDRLY
VSLKDLAEERKGKLEQHYWLFQLNREVDELEQWIAEREVVAGSPELGQDFEHVTLLLEKF
TEFAHETAMIGQERVNTVNQMVDELIDYGHGDAATIAEWKDGVGEAWADLLELIETRVQM
LSASQELHKFFSDCKEVAGHIEEKHKLLPDVALGDSTSTFTLQRMLSSFEHDIQALVIQV
RQLQENAAQLRTVYAGENAEAIQVQEQRVMQAWKELVSTCDQRKLQLTTTGDKIRFFGLV
RELVGWMDSIVCQIGTGEKPRDVSSVEVLMNYHQGLRGEIEARHKKLKSCVELGKTLLTS
KHQASGEIQERLDKVLKKQNEMMEKWEQHWVWLQQMLEVHQFAQEAVVADSWLSTQERVV
TSEQIGNSVDEVEQLIKRHEAFRKSAAAWEERFSSLRRLTTLERMENKSPFAIQQQQQQQ
QQPATPMLSRRVLPESRPSPVKQLVPVAGIRPVKQQAQLEIVDDAGDRDKRGGEEHAATV
AAPEPAAPRPHQAEGRQERPQNKAEPAEGRTERRGERQEPQSEPREPEYEAGDRRTTMAD
IVEQLQEKEAQERDSSLTAGLPNGIEKLPERVPRPDRPRARDRPKPRRRPRPKDPNQAGG
DSRRSRSAPSPQSSTTAPVTVSHTSEQEGFLARKHEFEAPNKKSSSRSWVNIYCVISKGD
LGFYKDAKSHKAGSTHNGESLITLSEATCEIANNYKKKKFVFKIRTCDGNEFLFQAKDED
EMDDWIKAASTAIAEHAEIAQLSGQIVPTTSSTDEGNPKRDSDRRFSLFGKKK
NT seq
7362 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaccaccactactgacctggacaacatggacatccaaagacaatacaacatc
aacagttgcagagaaacgtctgagagttatcgggaagaagagaacagctcttccaaactg
tttgaatcctcaaggataaaagccctggccgatgagagggacgccgtgcagaagaagacc
ttcaccaagtgggtgaactcgcacctggcacgggcgctgtgccaaatcacggacctgtac
gtggacctccgggacggctgcgtgttgaccaagctactggaggttctgtcgggggaacag
ttgcccaagccgacacggggccgtatgcggatccactcgctggagaacgtggacaaggcg
ctgcagttcctgaaggagcagcgggtgcacctggagaacgtgggctcccatgacatcgtg
gacgggaaccaccgcctcaccctgggcctcatctggaccatcatcctccgctttcagata
caggtgatcaaaattgaaacggaagataatcgggagactcgttcagccaaagacgccctg
ctgttgtggtgccagatgaagacagcagggtacccaggtgtgaacatccagaacttcacc
agcagctggaaggacgggcttgcgttcaacgccctcattcacaggcacaggcaagatctc
gttgactacagcaagctgcagaagtccaactccaccttcaacctccagcaggcgttcaat
gcggctgagcagcggctgggagtcgccaagctgcttgaccctgaagatgtgaatacggag
aatcctgatgagaaatctatcatcacttacgtggtgtcctattatcactacttctccaag
atgaaggccttggctgtggagggcaagaggatcgggaaggtgctggacaacgcgctggag
actgagcacgtgatcgcacggtacgagtctctggcgacggagctgctggagtggatcgca
cggaccatcacactcatcagcaaccagcgatttgcaaactccttggctggagtccagcag
cagctccaggtcttcaccacctactgcacggtggagaagccattcaagtttgatgagaag
gggaagctggaggtcttgctgttcaccatccagagcaaactgcgggccaacaaccagcag
ctgtaccaggcacccgaggggaggctcatatctgacgtcaacagggcatgggggaagctg
gagaaggcagaacacgagcgcgagggggcgttgcggaaggaactgatccgtcaggagaag
ctggaacagctggctcaccgctttgaccacaaggctgccatgagggaggcgtggctgacg
gagaaccagcggctcatctcccaggataactttggctacgacctgcccgcggtggaggcc
gccatgaagaagcacgaggcgatcgaggcagacgtcagctcgtacaaggagcgggtgcag
gtgatcacggagctggcccgggagctggaggccgagggctactacgacatcaagcgcatc
tccgctcagcgggacaacatcctgcggctgtggaccttcctgcaggagatgctggccgca
cgccgctcccgcctcgagctcaacctgtccctgcagaagatcttccaggagatggtccac
atgatcgactggatggaggggatgcaggttcagctgtgtgccaaggagctgggcaagcat
ctactggaagtggaggacctgctgcagaaacacagcctcctggaagcggacatttccctg
cagtcggaacgcctgaaagccttgaacgcagcagcgctggagttcacccagatcgagggg
taccagccgtgcgacccgcaggtgatttccaaccgggtgcaacatgtggacagctgcgtg
gccgagctacagcggctggctgggaaccgtcgcgcctcgctggagggctcccgctgcctc
tgggccttcctgcaggagatagaggaggcggagagctggatccaggagaagcaaagggtc
atctcctcgccccacctgggcaaggacgtgagcagtgtcacgctgctgttggccaagcag
cgggctttggcgggagagctaggcgggcggtgtggcctcctcacccagaccatcaccaaa
ggcgagcagatcctggccgagaggcatttcggcacgggcaacatccaggagcggatcctg
gaggtccgtgtccagtggaagaagctggacgagttgtccgccctcagactccaacacctc
caggaggctctcagcttcttccagctcaaggccgacatggacgacctggaggtctggctg
caggatgtctaccgcatcgtctccagcgacgactttggccacgacgagtactccagccag
tcgctggccaagaagcaccgctcgctggaggaggacatcgggcagcagcggccactggtg
gagggtctgggcgggcaggcggacgggctggcccccggctaccgggagctggaggaggtg
cggggccgggtggccgaggtggaggcgctctaccgggaggtgcgggaggtggcggggctg
cgccgtcagtggctgcaggacgctctggccgtctaccgcatgttcagcgaggtcaatgcc
tgcgagcggtggatcgacgagaaggagcagtggcttctccgcatggagatccccgagaat
ctggaggacctggagttggtgcagcagaggttcgagagcctggaacaggagatgaacagc
atgttgtcccgagttgtggaagtaaatgaagtcgtgcaacaactggtggagaatgggcac
cctagtgccactgaggtcatgagttgccaggaccacctcaacagcaggtggggccagatt
ctgcgtctggtgaagaacaagaaggacacgatgaactctctgctgtgtgttcagagctac
ctgctggagtgccaggagatcaagtgccagatccgggagaagaggaaggcgattgagtcc
acacagggcctggtcaatgactttggtggggtgatcgctctgcagaggaagctgtccacc
atggagggggcgctgactgtcatcgagcccaagctgatcggcctgcaactggaggccgag
gctttggcctccgcacaccctggacaggccatggacatcttggtccagttcgaggagatc
agcgaggagtgggagcagctgaagagggcgttgcagggttgcgaggactccctcagcgtg
gctggcaagctacagcagttcatccaggacttggacagcttcctgtcatggctggcgcgg
acccagggggcggcgctgtccgaagagttgcccggctcgctgggcgaggccgaggccttg
ctgaggcagcacgaggccctgcaggaggagatgggccgcagggaggaggactaccgccgt
atcctggccgtcagggagcccctcgcactgggccaggccgagctgcccctcagctccatc
cagcagtggctgggcaagctggagctgggctgggagaagatgcaacaggtgtggacccga
cggcaggaggccctgctccaggcacatgtctaccacctcttcctgcgggacgtcaggcaa
gccgaggccttcctcaacagccaggagtccaagctggcccagctggagctgcccgcgtcc
gtggctggagccgaggccgccatcaagaagcaccgcgacttcctggtgacgatggagatc
aacctgcagaagatcaacacggtggtggatgccggcgaacacctggtgaagggcggcaac
atctacatggacaagatcaaagatcagacggaatccatcatcaccaggagccagtgcaac
tacaagcttgcccacgagtggctggtgcacctgagcgatgagtgggagctgcaacggttt
ctccagagttgtcacgagttgggcgagtggattaatgagaagatgctgacggtccagaat
acgtcacacgatgatgctcagaaactgcacaaaaaatggctgaagcaccaggcgtttatg
gcagagctgttactgaaccgcgaatggttggataagatcgagaaggaggggcaagagctg
atcaaagagaagcccgagctggccgcggtggtgaggaggaaactgcaggagattcacgaa
tgctggacggttctggagagcacaacccaggagaaagcacggcacctgttcgacgtcaac
agggccgaacaactggtgcagacgtacagcgagctggatcggaggttgtcccaactcgag
gggcaactgcaggttggggacggagggcgagacatcgccacggttaacacccagctccaa
aaactacaggtgctcgagaaccagatggagggctggtacaaggaggtgggggagctgcaa
gcacaggcagccaccctgcagcagcagagctcggggaaagaccaggtgatggagaagcag
aacgtggtggagacgaggattgtgcgcctgatcgaaccgctgaagcagcggcggaggatt
ctgctggcgaccaaagaggtccaccagatcaccagggacatggaggatgagatgctctgg
gtggaggagcgtctgccattggcccagtccaaagatcacggagtcaacctccaaacagtg
cagctgcttctgaagaaacttcagaccctacagagggaggtccagggccaccacccgcgg
attggtgacgtgatggagcgagcgggccacattgcctccatacaacaaaccccagaggct
gacacggtgcgcgtgggtctggagcggctacgggagctgtggggcgctctgttagaggaa
gcagaagggcgacaacagcggctgctggccatgcagcgagcccagcagtactacttcgat
gcaggtgaggtagagtcctggctgagcgagcaggagctacacatgatgacggatgagaag
ggaaaggatgagcagagctcgctccagctgctgaagaaacatctgggtctggagcagacc
atcgacgattatgctgagaacatttgtgagctgtcaaagacctgcagagcgctgttggat
gaaggtcacccagagagtgaacagatcagcaagcagcagtctcagatcgaccgcctgtat
gtgagtctgaaggacctcgccgaggagcgcaagggcaagttggagcagcactactggctc
ttccagctcaaccgtgaggtcgatgaactggagcagtggatcgccgagagagaagttgta
gcgggatctccggaactaggccaagacttcgagcatgtcacattgctgctggagaagttc
acggagtttgcgcacgagacggcgatgatcggccaggagcgggtgaacacggtcaaccag
atggtggacgagctgatcgactacgggcacggggacgcggccaccattgccgagtggaag
gacggggtgggcgaggcctgggccgacctgctggagctgatcgagacccgggtccagatg
ctgtccgcctcgcaggagctgcacaagttcttcagcgactgcaaggaggtggccggccac
atcgaggagaaacacaagctacttcccgatgtggcactgggcgactccaccagcaccttc
acgctgcagcgaatgctcagctcctttgaacacgatatccaagccctcgttatccaggtg
cggcagctgcaggagaacgcggcgcagctgcggacggtgtacgcgggggagaatgcggag
gccatccaggtgcaggagcagcgggtgatgcaagcctggaaggagctggtgagcacctgc
gaccagcgcaaactgcagctgaccaccaccggagacaagatccgcttctttggcctggtc
cgtgagctggtgggctggatggacagcatcgtctgccagatcggcaccggagagaagcct
cgggacgtctcgtcggtggaggtgttgatgaattatcaccaggggctcagaggggagatt
gaagcccggcacaagaagctcaagtcgtgcgtagagttgggtaaaactttgctcaccagc
aaacaccaggcttctggcgagatccaggagaggctggacaaggtgctgaagaagcagaac
gagatgatggagaagtgggagcagcactgggtgtggttacaacagatgctggaggtccac
cagtttgcgcaggaggcagtggtggcggattcgtggctgagcacccaggagcgtgtggtc
accagcgagcagatcggcaacagcgtggacgaggtggagcagctcatcaagcggcacgag
gccttccgcaagtcagcagccgcgtgggaggagaggttcagctcgctacggagactcacc
acgctggagcggatggagaacaagtcaccgtttgccattcagcagcagcagcagcagcag
cagcagccggccacccccatgctgagccgcagggtgctgcccgagtccaggccctctccg
gtcaagcagttggtgccagtggccgggatccgtcccgtcaagcagcaggcccagctcgag
atcgtcgacgatgccggggaccgcgacaagcgcggcggggaggaacacgcggccaccgtg
gctgcgccggagccggctgccccgcgcccacaccaggccgagggccggcaggagcggcca
cagaacaaggcagagccggcggagggcaggacagagcgccggggagaacggcaggagccg
cagagcgaaccgcgggaacccgagtacgaagctggggacaggagaacaaccatggcagat
atcgtggagcagctacaagaaaaggaagcccaggaacgtgactcctcactcaccgccggt
cttcccaacgggattgagaaactcccggagagagtcccccgcccggacaggccgcgggcc
agagaccggcccaagcccaggaggagaccgcggccaaaagatcccaaccaggcgggcggg
gacagccgccgctcgcgctccgccccgtcgccccagagcagcacgactgcgcccgtcacg
gtctcccacacgtccgaacaagagggcttcctcgctcggaagcacgagtttgaagctccc
aacaagaaatcatccagcaggtcgtgggttaacatttactgcgtgatcagtaaaggagac
ctggggttttacaaagacgccaagagtcacaaagcggggtcaacccacaatggcgagtcg
ctcattacacttagcgaagccacatgcgaaatcgccaacaattacaagaagaagaagttt
gtgtttaaaatccggacatgcgatggcaatgagttcctattccaggccaaggatgaggac
gagatggacgactggatcaaggctgcctccacagccatcgcggaacatgcagaaatcgcc
cagctgagcggccagatcgtcccgaccacctcctccaccgatgaaggaaaccccaagcgt
gacagcgaccgaagattcagcctcttcggaaagaagaaatga
DBGET
integrated database retrieval system
