KEGG   Leucoraja erinaceus (little skate): 129714201
Entry
129714201         CDS       T09122                                 
Name
(RefSeq) ras-related protein ORAB-1-like
  KO
K07874  Ras-related protein Rab-1A
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:leri00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    129714201
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:leri04131]
    129714201
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:leri04147]
    129714201
   04031 GTP-binding proteins [BR:leri04031]
    129714201
Membrane trafficking [BR:leri04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    129714201
 Autophagy
  Other autophagy associated proteins
    129714201
Exosome [BR:leri04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129714201
  Exosomal proteins of other body fluids (saliva and urine)
   129714201
  Exosomal proteins of colorectal cancer cells
   129714201
GTP-binding proteins [BR:leri04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    129714201
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA SRPRB CPT AAA_7 FeoB_N ABC_tran AAA_16 AAA_22 AAA_5 PduV-EutP Septin AAA_29 TniB
Other DBs
NCBI-GeneID: 129714201
NCBI-ProteinID: XP_055519700
LinkDB
Position
38:complement(6439623..6469864)
AA seq 206 aa
MSAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTI
KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLEEIARYASENVNKL
LVGNKCDLTSKKVVDYTTAKEYADSLQIPFLETSAKNATNVEQAFVTMAAEIKNRMGTGP
THNDEKSNIRIQSTPLKQGSGGGGCC
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcagccatgaaccccgagtatgactacttgttcaagctgctgcttattggcgattct
ggtgttggcaaatcttgtctactgctccggtttgctgatgacacttacactgaaagctac
atcagtaccattggtgtcgacttcaaaatccgaaccatagaattagaaggcaaaaccatt
aagctacaaatttgggatacggccggacaagaacggttcaggaccatcacttccagttac
tacaggggagcacatggcattatcattgtctatgatgtcaccgatcaggattcctttaat
aatgtcaagcagtggctggaagaaatagctcgttacgcaagtgaaaatgtgaacaaattg
cttgtggggaataaatgcgacttgactagtaagaaggtggtggattatactacagcgaag
gagtatgctgactctcttcaaatcccatttttggaaacgagcgcaaaaaatgccaccaac
gttgaacaggcatttgtgacgatggctgccgagatcaagaatcggatggggactggacca
acacacaacgatgagaagtccaatatccgaatccagagcactcccttaaagcaaggcagt
ggtggtggcggctgctgctaa

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