Leucoraja erinacea (little skate): 129714207
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Entry
129714207 CDS
T09122
Name
(RefSeq) calpain-3-like isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
leri
Leucoraja erinacea (little skate)
Pathway
leri04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129714207
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
leri01002
]
129714207
Enzymes [BR:
leri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
129714207
Peptidases and inhibitors [BR:
leri01002
]
Cysteine peptidases
Family C2: calpain family
129714207
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Motif
Other DBs
NCBI-GeneID:
129714207
NCBI-ProteinID:
XP_055519706
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All DBs
Position
38:6748677..6784335
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AA seq
612 aa
AA seq
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MGNTSSPGSRDPSPERFPGPGEREPSPGEGEPLPSEGGSGSGSGSAAGSRDDPIPFRGQR
FELIRRECLRDRRLFVDRTFPADATSLGSMSEPGVQWVRATKLLKNPQFFIDSFSTTDIV
QGNLGDCWFLAAMSSLTLDGSLFNYVVPNDQSFQENYAGIFHFRFWQFGRWVEVVVDDFL
PTRNLRLIFTASSSWRELWSALLEKAYAKLHGSYSILSGGLVSEAMEDFTGGIAVTMEMA
NTKPRELWYMVKQALNKQTMISCSITADSSGEMETERPLGLLAGHAYSIVDAEKVRLGNA
NVKLFRLRNPWGRKEYNGPWSDRSTVWNEVSQEEKMRLKLKFNEEGEFWIPANILVEQFS
DVELCSHDPICNHHTECVWGITNHEGMWMAGISAGGNLGFDTFSRNPQYRLQLLEEDEES
HGGSPACTIAVQLLQKDGRKTGSKHLFIAFHIFAVPKWHEDRAAPFGRKFFQSRQAVFES
GNYTNTRAVSRRTQLPPGQYVIVPCTYNQNEERGFFLRIFARKTNLSRENGRTVNDFNPT
ANRTETDGATAFRRNSEILHEVTDTSKFLSAPEFMKVFNSAADKRFHLTLETCCSLLFTL
TEPDRRGWMRSP
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacaccagctcaccaggttcccgcgacccctctcccgagagattccccgggccg
ggggagagggagcccagtcccggggagggagagcccctgcccagtgagggcggctccggc
tccggctccggctccgccgcgggttccagggacgatccgatcccgttccgggggcagcgc
ttcgagctgatccgccgcgagtgtctgcgggaccggcgcctgttcgtggatcgcaccttc
cccgccgacgcgacctcccttggctccatgtcggagcccggggtacagtgggtgcgggcc
acgaaactcttaaaaaatcctcagttctttatcgactcgttcagcaccacggacatagtc
caggggaatttgggtgactgctggttcctggcggcaatgtcctctctgaccctcgacggc
agcctcttcaactatgtggtccccaacgaccagagcttccaggagaactacgccggcatc
ttccacttccggttctggcagtttgggagatgggtggaggttgttgtcgatgactttctc
cccactcggaacctccgtctgatcttcaccgcctcttcctcgtggagagagctgtggagc
gctctgctggagaaagcctacgccaagttacacggttcctactccatcctgtcggggggg
ctggtgtcggaggctatggaggacttcactggtggtattgccgtgaccatggagatggcc
aacaccaaacccagggagctgtggtacatggtgaagcaagctctcaacaaacagacaatg
atctcctgctccatcacggccgacagctcgggagagatggagacggaacgacctttgggc
ttgttggccgggcatgcctactccattgtggatgcggaaaaggtcaggctggggaatgct
aacgtgaaactcttccgactgagaaatccgtggggccgcaaggaatacaacggaccctgg
agcgacaggtcgaccgtgtggaatgaggtgagccaggaggagaagatgaggctcaagctg
aagttcaatgaggagggtgaattctggattcccgccaatatactggtggagcagttcagc
gacgtggagctgtgcagccacgaccccatttgtaatcaccacacagagtgtgtgtgggga
atcaccaaccacgagggcatgtggatggcagggatcagtgccggtggcaatctcggcttt
gacacgttctcccgcaacccgcagtaccggctgcaactgttggaggaggacgaggagtcg
cacgggggctcgccggcctgcaccatcgccgtgcagctgctgcagaaagacgggcgcaag
accggctccaagcacctgttcatcgcattccacatcttcgcagtgcctaagtggcacgag
gaccgggctgctcccttcggccgcaagtttttccagtcgcgccaggcggtgttcgagtcg
gggaattacaccaacacgcgtgccgtctcccgacgcacgcagctgccgccgggccagtat
gtcatcgtgccctgcacctacaaccagaacgaggagagaggattcttcctccgcatcttc
gcacggaagaccaacctgtccagagagaatggccgcactgtcaacgacttcaatcctacg
gctaacaggacggagacggatggtgccaccgcctttcgacgtaattcggagatcctgcat
gaagtcactgatactagcaagttcttgagtgccccagaattcatgaaggtcttcaattca
gctgccgataaacggttccacctcaccctggagacctgctgcagtttgctgttcacactc
actgagccggacagacggggttggatgagatcaccgtga
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