Leucoraja erinaceus (little skate): 129714218 Help Entry 129714218         CDS       T09122                                  Symbol sympk Name (RefSeq) symplekin   KO K06100   symplekin Organism leri  Leucoraja erinaceus (little skate) Pathway leri03015   mRNA surveillance pathway leri04530   Tight junction Brite KEGG Orthology (KO) [BR:leri00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     129714218 (sympk)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     129714218 (sympk)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:leri03021]     129714218 (sympk)    03019 Messenger RNA biogenesis [BR:leri03019]     129714218 (sympk) Transcription machinery [BR:leri03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      129714218 (sympk) Messenger RNA biogenesis [BR:leri03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      129714218 (sympk)     U7-dependent histone pre-mRNA processing factors      129714218 (sympk) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Motif Other DBs NCBI-GeneID:  129714218 NCBI-ProteinID:  XP_055519724 LinkDB All DBs Position 38:6974244..7007051 Genome browser AA seq 1457 aa AA seqDB search MRTVPLGCLRRGRMDMAAIGATADSGASRRCLATQYFNEEENNAIESLTTSERVVDLLNQ AALIVTDNKITVLKQVQELIVNKDPTLLDNFLDEIIAFQSDKSIDVRKFVIGFMEEACKR DNELLPKLIANLNMLLKDENVNVVKKVILTMTQLYKVALQWMVKSKVINEMEEACWDMVS VMKDDIVLMLDSDNDGIRTHAIKFIESLIITLSPRTPDSDVPRRQENDISLDRIVRDHSC IKASALQEEGKMALDQLLKFMVHPAISSINLTAALGSLATIARQRPMYMSEVIQAYETLH ANLPPTLAKSQVSSVRKNLKLHLLSVLKHQSSFEFHAQITTLLLDLGTQQQEIVRNMPSL KDVRKRHREETDQGLKKIKIEPLGEDDEDKDLEQASVSMVKPSSSQNTQSAIDVSAQYLM PLLSPENVANLVLISMVYLPDVMPASFQATYTPVESAGTDAQIKHLARLMATQMTSAGLG PGVDQMKLQADDDSKLGKDVKSDGPVIKRRYSTLRKGQAISVVGAPVPFSQPGKEEMQTK RRPEPIMPSSQQRLMSQSGRKKVFRLCDVLQQLPVEKMDKLKIGALQRILNSEKAVARGG AGPIRVKILARLVTQFDGKMKGEMLDFILEDIRNRVDLAFAWLYQEYNLYLSHWPNGMLD NYDACLTSLLSGLQEKPDQKDGLFTKLVLEAPCITDNALEVIRRYCEDETRIYLGMSTLR DLVFKRPSKQLQYLHVLLDLSSHEKDKVRSQALMFIKRMYEKEQLREYIEKFALNYLQLL VHPNPPSILFGADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIK RTVLRVIEQPIRGMGMNSPELLLLVENCPKGAETLVTRCLHILTDKVPPSPELVKRVRDL YHKRVPDVRFLIPVLNGLEKKEVILALPKLIKLNPIVVKEVFNRLLGTTHMGEGGSAAIS PLTPGDLLIALHNIDSNKCDMKSIIKATNLCFGERNVYTSEVLAVVMQQLMEQSPLPMLL MRTVIQSLTMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVLLQLPP TQLTNVFEKCPELREPLLTHVRSFTPHQQNHIPKSIMIVLEANSKSEGEPMEAKPMNEEE LQHLTIVHAQKDMINMRLAQEKALKRKLEEEQKFKQQQLAAQLHSVLALPSLMSLKPLGL TVPVSPDLGILKPLIQPLLSTFVQPPPNPSAHAPLKALVPPPVSAPALAPSIAPLLTVVA SPAKPAVGSPGEAAKAPPPSQAAASPLDQPARPPPTLVAKSAAMPPVGEPMEVGSSAPDS DAVREPPHQTIIINVKEEDERPMALDEPSQAAVVMDTGPEGQIVLEDTMAGEQASQQPLL HEVGHLVAADMTERVILIRDEPPVVGEPASGGERAAKPPGEEPGVVPEETSGEGSPDPGD GEQQPVTKRKSALRKSP NT seq 4374 nt NT seq  +upstreamnt  +downstreamnt atgcgcactgtgccgctgggctgcttgaggcgcggacggatggacatggcggcgattgga gcgaccgccgatagcggcgcctcacgccgctgcctcgccacccagtacttcaacgaggag gagaacaacgccatcgagagtctgaccaccagcgagagggtggtggatttgctgaatcag gctgcgctcattgtgactgacaacaaaatcactgttctcaaacaggttcaagagctgatt gtgaataaggatcccaccctccttgacaactttctcgatgaaatcattgcatttcagtca gataaatccattgatgttcgcaagtttgtgattggattcatggaggaggcatgcaagcgg gacaatgagctgctgccgaagctaatcgctaacctcaacatgctgctgaaggacgagaac gtcaatgtggtgaagaaggttattttgaccatgacccaactgtacaaggtggcactgcag tggatggtgaagtcaaaagtcatcaatgaaatggaggaggcgtgctgggatatggttagc gtcatgaaggatgacattgtcttgatgctggactctgataatgacggaatccgaactcat gccatcaaattcatcgagagtttgatcatcaccctgtcacctcgcactcccgattctgac gtgccgaggaggcaggagaacgacatcagcctggatcgcattgtgagggatcactcttgc atcaaagccagtgcacttcaagaagagggtaaaatggctctggatcagctcctgaaattc atggttcaccctgccatctccagcatcaaccttacagctgccctgggctccttggccacc atcgcaaggcaacgacccatgtacatgtctgaagtgatccaggcatatgaaacccttcat gccaacttgccgccgacgttggcgaagtctcaggtcagcagcgtgcgcaagaacctgaag ctgcacttgctgagcgttctcaagcaccagtcctccttcgagttccacgcccagatcacc acgctgctcctggacctgggcacgcagcagcaggagatcgtgcgcaacatgcccagcctg aaggacgtgaggaagcgacaccgcgaggagactgaccaggggctgaagaaaatcaaaata gagcctttaggagaagatgatgaagacaaagatcttgagcaagcgtccgtttccatggtt aaaccatcgtcatcccagaacacgcagtctgccattgatgtttcagcacagtatctaatg cctctgctttcgccagagaacgtggcgaatttggttctgatcagcatggtctatttacca gacgtgatgccggcatcattccaggctacttataccccagtagagtcggcagggacggac gcccagattaaacacttagcccgactcatggccacacagatgacgtcagcaggtctcgga ccaggtgttgaccagatgaaacttcaggccgatgacgactcgaaactggggaaagatgtt aaaagtgacggcccggtcatcaagcggcgctactccacgttgcgtaaggggcaagcgata tctgtcgtgggggcacccgtacctttctcgcagcccgggaaagaggagatgcaaacaaag cggcgtccagagcccattatgccttccagtcagcaaaggctgatgagtcagagcggacgg aagaaggtgttccgactgtgcgatgtgttgcagcagctgcctgtggagaagatggacaag ctgaagattggagctctacagcgtatcctcaactctgagaaagcagtggcacgcggtgga gctggtccgattcgtgtgaagatcctggcacgtctcgtgacgcagtttgatgggaaaatg aaaggggagatgctggatttcatcctcgaggacattcgaaaccgcgttgatcttgccttt gcgtggctgtaccaagagtataacctgtacctcagccactggcccaacggcatgcttgac aattacgatgcgtgcctgaccagcctgctgtcgggcttgcaggagaaaccagaccagaag gatggactgtttacaaaactggttctggaggctccgtgcataactgacaatgcgttggag gtgatccggagatactgtgaggatgagactcgcatctatctgggaatgtcgacgctgagg gacttggtcttcaaacgcccatcaaaacagctgcagtacctgcatgtgctgctggatcta agctctcacgagaaggacaaggtccgttcgcaggcactgatgttcattaaacgaatgtat gagaaggagcagctacgcgagtacatcgagaagtttgccctgaattacttgcagctgctc gttcaccccaacccgccctctattctgtttggggcagacaaagacacagaggtggcagct ccttggacggaggagacggtgaaacagtgcctgtatctgtacctcgctctgcttccccag aaccataaactcattcacgagctggctgctgtctacacagaggccatcgctgacattaaa cgcacggtgctgcgggtcatcgaacaaccgattcgaggaatgggaatgaattcacctgag cttctcctgctggtggagaactgtccgaaaggcgcggagacactcgtcactcgctgcctg cacattttaacagacaaagtgcctccgtcccctgagctggtgaagagggtccgtgatctc taccacaagagggtccccgatgtccgatttctgatcccagtgcttaacggtcttgagaag aaagaagtaatcctggcgctgcccaaactgatcaaactcaatcccatcgtggtgaaggag gtctttaaccggctgctgggaaccacacacatgggtgaaggaggctctgctgcgatctca ccattgacccctggtgaccttctcattgccctgcacaacatcgactctaacaagtgcgac atgaagtcaataatcaaagcgacgaacctgtgctttggtgagaggaacgtgtacacgtcg gaggttcttgctgttgtgatgcagcagctgatggaacagagcccactgcccatgctgctg atgagaaccgtaatccagtcgctcaccatgtatccacgtcttgggggttttgtcatgaac atcctgtcccggctcatcatgaaacaggtctggaagtatcccaaggtgtgggaaggcttc attaagtgctgccaacggacaaagccgcagtcattccaagtgctgttgcagcttccaccc acgcagctcaccaacgtctttgagaagtgcccggagctccgagaacctctcttgacgcac gtgcgttcgttcacaccgcaccagcaaaaccacattccaaaatcgataatgattgtgctg gaggccaactccaagtcagaaggggaaccaatggaggctaaaccgatgaatgaggaagag ctgcaacacctgaccattgttcatgcgcagaaggatatgatcaacatgcgcctggctcaa gagaaagccttgaagaggaaactggaggaggagcagaagttcaagcagcagcagctggca gcccagttacactccgtcctcgccctgccgagcctcatgtcgctgaagcccctcggcctg acagtccctgtctctccagacctgggaatcttaaagcccctcatccagcctttgctgagc accttcgtgcagccccctcccaaccccagtgcgcatgctccgttgaaagccctcgtccca cctccagtgagtgcccctgccctggctccatccattgcccctcttctgaccgtcgtggca tcccccgccaagcctgccgttggctcgcccggagaggccgccaaagctcctccccccagc caggcagccgctagccccctcgatcagcccgcccggccccctcccaccctggtggccaag tccgccgccatgccgcctgtgggggagccgatggaggtcggcagctctgcccccgattcc gacgccgttcgagagccgccgcaccagaccatcatcatcaacgtgaaggaggaagatgag aggcccatggctctggatgaaccgtcccaggcagcggtggtcatggacactgggccagag ggacagatcgtactcgaggatacaatggcgggggaacaagctagtcaacagcctctgctc cacgaagtgggtcacctggtagcggcggacatgactgagagggtcatcctcatccgggac gagccgccagtggtgggcgagccggcttctggcggagagcgagcggccaagccccctggt gaggaaccgggcgtggtgcccgaggagactagtggcgaggggagcccagacccaggagac ggagagcagcagcccgtcaccaaacgcaagtctgctctgaggaaaagcccctaa

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