KEGG   Leucoraja erinaceus (little skate): 129714246
Entry
129714246         CDS       T09122                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    129714246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:leri03400]
    129714246
DNA repair and recombination proteins [BR:leri03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     129714246
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_DCAF4 WDR54 Beta-prop_IP5PC_F WD_LRWD1 WD40_RFWD3 Beta-prop_Vps41 RAWUL Nucleoporin_N WD40_like Tfb2_C Beta-prop_VPS8 PdxJ
Other DBs
NCBI-GeneID: 129714246
NCBI-ProteinID: XP_055519769
LinkDB
Position
2:complement(112018473..112109000)
AA seq 677 aa
MAAHHRQNTAARRKVQVSYVIRDEVEKYNRNGVNALQLDPTLNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDVVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPAPAIWVSTTKSSVNKWSMKGIHNFRASGDYDNDCSAPLIPLCTQPEQVIKGG
ASIIQCHILNDKRHIVTKDTNNIVAFWDVLKACKVEDLGKVEFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDENDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHIV
PMDEEENEMNIANGEQENRIQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDAGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKPGEQDKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggcgcatcatcggcagaacacggcggcgcgaaggaaagtgcaggtatcgtatgtc
attcgggatgaagtagagaagtataatcgtaatggagttaatgcgcttcagctagatccc
acgctaaatcgactatttacagccggccgggattcaataatcaggatatggagtgtcaac
cagcacaagcaagatccttacattgcctctatggaacaccacactgactgggtaaatgat
gttgtattgtgctgcaatggaaagaccttaatatcagcttcatctgacactacagtgaaa
gtgtggaatgctcacaaaggattttgtatgtctactttgcgaactcacaaggattatgtg
aaggcattggcgtatgcaaaagataaagagttggtggcttcagcagggctggacagacag
attttcctctgggatgtaaatactcttacagcactgactgcctcaaacaacacagtaaca
acgtcatcgctgagcgggaacaaagactcaatttatagccttgccatgaaccagatggga
acagtaattgtttctggatcgactgaaaaggttctgagagtgtgggatcccaggacgtgt
gcaaaactgatgaaacttaaaggacacacagataatgtcaaagcgttactattgaacaga
gatggcacacagtgtttgtctggtagttctgatggaacgatccgcctgtggtctttgggt
caacagagatgtatagcgacgtatcgtgttcacgacgaaggagtttgggcattgcaggtc
aatgaagcctttacgcacgtctactcaggaggacgagaccgaaaaatatactgcacggac
ctgcggaatcccgacattagagttctaatctgtgaggagaaagcaccggttctaaagatg
gagctagatagatcagctgacccagccccagctatttgggtatccactacaaaatcatct
gtgaataaatggtccatgaaggggattcacaatttcagggcatctggagattatgacaat
gactgcagtgcccccttaattccactttgcacacagccagaacaagtcatcaaagggggc
gcaagtatcatccagtgccatatattgaatgataagaggcacattgtaaccaaagatacc
aacaacattgtggcattctgggatgtcctgaaggcttgtaaggttgaagatcttggaaaa
gtagaatttgaagaagaaatcaagaaaagatttaaaatggtttatgtgccaaactggttt
tcagtggacttaaaaactgggatgttgacaattactttagatgagaatgactgctttgcg
gcttgggtgtcagcaaaggatgctggatttagcagtccagatggatccgacccaaaactg
aaccttggaggactgttgcttcaggctttgttggagtattggccaaggacacacattgtt
ccaatggacgaagaggagaatgaaatgaatatagctaacggtgagcaagaaaacagaatt
cagaaaggcaatggttatttccaggtgccaccacatactccggtcatatttggcgaagca
gggggtcgcactctcttcaggcttttgtgtcgagacgcagggggtgaaacagaatccatg
cttctgaatgaaactgtgcctcagtgggttatcgatatcaccgtggacaagaacatgccg
aaattcaacaaaatcccattctacctccaacctcattcttcttcgggagcaaaaacactt
aagaaggatcgtttgtcggccagtgacatgctgcaggttcgaaaagtgatggaacatgtt
tatgagaagatcatcaacctggataatgaatcgcaaacgacaagctcgtcaaacaatgag
aaacccggggagcaggacaaggaagaagacattgctgtgctggccgaggagaagatcgaa
cttctttgtcaagatcaggtactcgatccaaacatggacctgcggacagtgaagcatttc
atctggaaaagcggaggggacctgacgctccattatcggcagaagtcaacgtga

DBGET integrated database retrieval system