Leucoraja erinaceus (little skate): 129714255
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Entry
129714255 CDS
T09122
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 4 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04261
Adrenergic signaling in cardiomyocytes
leri04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129714255
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129714255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129714255
Ion channels [BR:
leri04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129714255
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
129714255
NCBI-ProteinID:
XP_055519781
LinkDB
All DBs
Position
2:112188500..112485752
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AA seq
1955 aa
AA seq
DB search
MALLFVPSGPHCLRRFTCESLAAIERRIAEEQALVARKDHKEEGEEEKPTPHCDLEAGKQ
LPIIYGDVPSKLIGQPLEDLDSFYSNKKTFIVLNKGKTIFRFSATDAVYVLTPFHRVRRI
AIKVLVHALFNIFIMCTILTNCVFMTMSDPKPWTKHVEYIFTGIYTFESLIKILARGFCI
DKFTFLRDPWNWLDFSVILMAYVTEFVKLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVRKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVRDWRIYNNSTLNETGNYTWPWD
LTYDEFINNDTNHYRLKGRKDPLLCGNNTDAGKCPPGFMCLKAGKNPDYNYTSFDSFGWA
FLSLFRLMTQDFWENLYQQVSARTGGTMLFFVVVIXMINLILAVGSXGATIAVAKEKEFQ
SRGDLGHLQFLASTNLCEHVPQELNRLGHETLSRTSSERSHLSAKSNKERSFKSRNGKEL
GISETAKGPRSASEEGLPRKPLLAPILTNHHPLRRGSIFRFRTHSVDAAVENTFSDDEGS
VFDESESVRSSLCLPQLNRTNSNQSHGSQRSVAGGRRKLHSAVDQNGVVSVVGGSPSSPQ
STLRLPQVTVDKPFNDDNQTSLSDNETSKCQLLTDHRVSVSYLEESHQRERAVSAASIIT
NTMEELEDSRLKYPQCWYYFSQTFLIWNCCPMWIKTKKIMKYIVMDPFLDLAITICIVLN
TLFMALEHQPMSDEFNNMLQVGNLVFTAIFTAEMVMKIIALDPYYYFQQGWNIFDSIIVC
LSLIELGLAKVDGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSMGALGNLTLVLAIIV
FIFAVVGMQLFGKKYKVEFCKVPEKCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCME
VAGQPLCIVVFMLVMVIGNLVVLNLFLALLLSSFSADNLSSPDEDGEMNNIQMAVARIQR
GIRFVQRAVVEFFQNLCKGSEPPMEGKTVMELPAYVFNHSGSDKRKDSMGKDGNGTAGGL
GNNGTAVGKRSEGSVSESLLGDVVPIAVIEPELDTCEDEEMSTFTELAVDEQKLDGVSSC
SEGSTIDLTSKGDEMENNSEHPEEAVDPDDCFTDACVRHFSCCQVNITTGSGRTWWNLRK
TCYKIVEHNWFETFIIFMILLSSGALTFEDVNIDKKPVIKVVLEYLDKVFTYVFVLEMLL
KWVAYGFKKYFTNAWCWLDFLIVAVSVVSLTANALGYAELAAIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIMNVFFVCLIFWLIFSIMGVNLFAGKFYKCKNTTSGDMFPIED
INNRSECEAMNRSDVIWHNEKVNFDNVGLGYLALLQVATFKGWMSIMYAAVDSRNIGEQP
EYEINTYMYVYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKISGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPLNRFQGVIFDLVTKQAFDIIIMILICLNMVTMMVETDNMDSNMER
ILFIINTTFIVLFTTECTLKIIALRQYFFTVGWNIFDFVVVILSIIGLVLSDLIEKYFVS
PTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGMAN
FAYVKKEDGIDDMFNFETFGNSMICLFQITTSAGWDGLLSPILNTESPDCDPKKENQGTN
IKGDCGNQSVGIVFFVSYIIISFLIVVNMYIAIILENFSVATEESSEPLSEDDFEMFYEV
WEKFDSEATQFIEYSALPDFADALKEPLRVAKPNKLKLIAMDLPMVSGDRIHCLDILFAF
TKRVLGESGEMDALKLQMEDKFMAANPSKISYEPITTTLRRKQEEVSALVIQRAYRRHLL
RRSMRQASFLYRHRASDVNIIVEEAPEKEGLIAAMIKEHYSPELERSETMSSSSSPPSYN
SVTRALGDNVVVKVTDPLMPHDFVSGPDKDRESLV
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atggcactcctgttcgtaccgtcaggacctcactgtctgcgtcggttcacttgcgagtcc
ctggctgccatcgagaggcggatcgctgaggagcaagcgctcgtcgccaggaaggatcac
aaagaggagggtgaggaggaaaagcccactccacactgtgacctggaggcgggcaaacag
ctgcccatcatctacggcgacgtcccatcaaaactcattggtcagccattggaggacctg
gactccttctacagcaacaagaagacatttatagtactcaacaaagggaagaccatcttc
cgatttagtgccactgatgcggtatacgtcctgactccttttcaccgtgttagaagaata
gctattaaagttttagtacatgcattgttcaatatctttataatgtgcactattttgacc
aactgtgtgttcatgacaatgtccgatcccaaaccatggacaaaacacgttgagtacatc
ttcaccggcatttacacttttgaatcattgataaaaatcctggcgagaggattctgcatc
gataagtttacgttccttcgcgatccgtggaactggttggatttcagtgttattttgatg
gcgtatgtaacggagttcgtgaaactcggcaatgtttcagctcttcgtactttcagagta
ttgagggcgttgaaaacgatttcggtcatcccaggcctaaagaccattgttggtgcgttg
atacaatccgtgaggaagctagcggacgtgatgattctgacggtgttctgcctgagtgtc
tttgcgctcatcggcctccagctgttcatggggaacctgcggcagaagtgcgtgcgtgac
tggcggatatacaacaattccacgctcaacgaaacgggcaactacacctggccctgggac
ctgacgtacgacgagttcatcaacaatgacacaaaccactatcggttgaaaggtcgcaag
gatcccttactttgtgggaacaatacagatgcggggaagtgcccccctggcttcatgtgt
ctgaaggcagggaagaaccctgactataactacaccagttttgattcgtttggctgggcc
ttcctctccttgttccggctaatgactcaggatttctgggaaaacctctaccagcaggtc
agtgccagaacgggcgggaccatgctcttcttcgtggtggtcatcnnaatgatcaacctg
atcctggctgtggggtctnngggggccaccatcgctgtggccaaggagaaggagttccag
agcagaggagatctaggacatctgcagttccttgcttcgactaacctttgtgaacacgtt
ccacaggaattgaacagactgggacacgagaccctatcgcgaacctcttctgagagatca
cacctaagtgccaaaagcaacaaggagagaagctttaagagccggaatgggaaagaactg
ggaatatcggaaacagcgaagggaccgaggtcagcatcagaggagggtctaccccgcaag
cctctgctggcgcccatcctcaccaaccaccaccccctgcggaggggcagcatcttccgc
ttccggacgcactcggtggacgccgcggtggagaacacgttctcggacgacgagggcagc
gtcttcgacgagagcgagagcgtcaggagctcgctgtgcctgccccagctcaaccgcacc
aacagtaaccagagccacggcagccagcggtccgtggccggcggccgccgcaagctgcac
agcgccgtggaccagaacggcgtggtgtcggtggtgggaggatcacccagctcaccgcag
agtaccctgcgccttcctcaggtcaccgtcgacaagccattcaacgacgacaatcagacc
tccctgtcggacaacgagacgagcaagtgccagctactgacggatcaccgagtgtcggtg
agttacctggaggagtcgcaccaacgagagcgggcggtcagtgcggccagcatcatcacc
aacaccatggaagagcttgaagattctcggctgaagtatcctcagtgctggtattacttt
tcacaaacttttcttatctggaactgttgtccgatgtggattaaaacaaagaagattatg
aagtacatcgtgatggatcccttcctggacttggccatcaccatatgcatcgtgctcaac
accttgttcatggccctggagcatcagccaatgtccgacgagttcaataacatgctccaa
gtgggaaacctggtcttcactgcgatcttcacggccgagatggtgatgaagatcattgcc
ctggacccttactactacttccagcaggggtggaacatctttgacagcatcatcgtgtgc
ctgagcctgattgagctgggcctggccaaggttgacggtctctctgtgctccgctccttc
agactgctccgagtcttcaagctggcaaaatcatggcccaccctcaacaccctgatcaag
atcatcggcaactccatgggagccctgggcaacctgaccctggtgctggccatcatcgtc
ttcatctttgccgtggttgggatgcaactcttcggcaagaaatacaaggtggagttttgc
aaggtccccgaaaagtgccagctcccccgctggcacatgcatgacttcttccactccttc
ctcatcgtcttccgggtgctgtgcggcgaatggatcgagaccatgtgggactgcatggag
gtggctggccagcccctgtgcatcgttgtcttcatgctggtcatggtgatcggaaacctg
gtggtgctgaacctcttcctggccttgctcctaagttctttcagcgcggacaacctgagc
tctccggatgaggacggcgagatgaacaacatccagatggctgttgccaggatacaacga
ggcatcaggtttgtccaacgcgccgtggtggagttcttccagaacctgtgcaagggctct
gaacctcccatggaggggaagaccgtgatggagctccccgcctatgtcttcaaccacagc
ggctcagacaagcgcaaggacagcatgggcaaggacggcaacgggacggcgggcgggctg
gggaacaacggcacggcggtgggcaagcggagcgagggctcggtctccgagtccctgctg
ggcgacgtggtccccattgcggtgatcgaacccgagttggacacctgtgaggacgaggag
atgagcaccttcactgaattagctgtcgacgagcagaagctggatggagtctccagttgt
tcagaaggaagcaccatcgacctgacgagcaaaggggacgagatggagaacaactctgag
cacccggaggaagcggtggatccagacgactgcttcacggatgcttgtgtccgtcacttc
agctgctgccaggttaacatcaccactggttccgggagaacttggtggaacctgaggaaa
acctgctacaagatcgtggaacacaactggttcgagaccttcatcatcttcatgatccta
ctgagcagtggagccctgacgttcgaagacgtcaacatcgacaaaaagccagtgatcaag
gtggtgctggaatacctggacaaggtgttcacctacgtctttgtgctggagatgcttctc
aagtgggtggcatacggcttcaagaaatatttcaccaatgcctggtgctggctggacttc
ttgattgtggcggtctcagtagtcagcctaacagctaatgccttgggatacgctgaacta
gctgccattaaatcccttcggacactcagagctttgagaccattaagagccttgtcacga
tttgaagggatgagggtggtggtcaacgcgctggtgggcgccattccgtccatcatgaac
gttttcttcgtctgcctcatcttctggctcatttttagcatcatgggggtcaacctgttt
gcgggcaagttctacaagtgcaagaacaccaccagcggggacatgttccccatcgaggat
atcaacaacaggagcgagtgcgaagccatgaaccgctcggacgtcatatggcacaatgag
aaggtcaacttcgacaatgttggcttgggctacctcgccttgctccaagtggcaaccttc
aaaggctggatgagcattatgtacgctgcggtagactcaagaaatatcggtgaacagcct
gaatatgagatcaacacctacatgtacgtctactttgtgatattcatcatatttggatcg
tttttcaccctgaacctcttcatcggtgtcatcattgataactttaaccagcagaagaaa
aagataagtggtcaggacatcttcatgacagaggaacagaagaaatactacaatgcaatg
aagaaacttggctcgaagaagccacagaaacctatcccaaggcctttgaatagattccag
ggagtcatcttcgacttggtcacgaagcaagcctttgacatcatcatcatgatcttgatc
tgcctcaacatggtgacgatgatggtggagacagacaacatggactctaacatggagagg
atcctcttcatcatcaacaccaccttcattgtgctcttcaccaccgagtgcacgctaaag
atcatcgccctcaggcagtacttcttcaccgttgggtggaacatcttcgacttcgtggtg
gtgatcctctccattatcggtctcgtattgtcggacctcatcgagaaatactttgtgtct
cccacactgttccgagtcatccggctggcacggatcgggcggattctgcggctcatccgg
ggggccaaggggatccggaccttgctgtttgccctaatgatgtccatgccggccctgttc
aacatcggcctcctcttgttcctagtcatgttcatctacgccatcttcggcatggccaac
ttcgcctatgtgaagaaggaggacggcatagacgacatgttcaacttcgagaccttcggc
aacagcatgatctgcctcttccagatcaccacgtcggcgggctgggacggcctgctcagc
cccatcctcaacaccgagagcccggactgcgacccaaagaaggagaaccagggcaccaac
atcaagggggactgcggcaaccagtcggtgggcattgtcttcttcgtcagctacatcatc
atctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcagcgtg
gccaccgaggagagctcggagccgctcagcgaggacgactttgagatgttctacgaggtg
tgggagaagtttgactcggaggccacgcagttcatcgagtactcggccctgccggacttt
gctgacgccctgaaggagccgctgcgtgtggccaaacccaacaaactcaagctgatcgcc
atggacctccccatggtgagcggcgacaggatccactgcctggacatcctcttcgccttc
accaagagggtgctgggtgagtcgggcgagatggacgccctcaagctgcagatggaggat
aagttcatggcggccaacccttccaagatctcctacgagcccatcaccaccaccctgagg
agaaagcaggaggaggtatccgccctggtcatccagagggcctacaggaggcaccttctc
cgccgctccatgaggcaggcttccttcctgtaccgccacagagccagcgacgtcaatatc
atcgtggaggaggcgcccgagaaggaagggctgatcgccgccatgatcaaggagcactac
agccccgagctggagaggtcagagacaatgtcctcctcctcctctccgccatcttataac
agtgtcacccgagcccttggtgacaacgttgtggtcaaggtgactgaccctctcatgccc
catgattttgtgagtgggcccgacaaagacagggagtcgttggtgtaa
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integrated database retrieval system
