Leucoraja erinaceus (little skate): 129714622
Help
Entry
129714622 CDS
T09122
Name
(RefSeq) zinc finger protein GLI1-like isoform X1
KO
K16797
zinc finger protein GLI1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129714622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129714622
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
129714622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
TSTD2_N
zf_ZIC
Motif
Other DBs
NCBI-GeneID:
129714622
NCBI-ProteinID:
XP_055520289
LinkDB
All DBs
Position
40:2456814..2515261
Genome browser
AA seq
1395 aa
AA seq
DB search
MEALPRAVAVAEGKAADDGGGWRACGRRSPQPSAAGRGAQQHYSAFQASMPADSLLHDCG
NLYDPSVPQTVRGCAPSDGPAHSDIPFGHVEGHAGCAALHHLPSPYVDHQLRPGQGQCAS
LPAPHPLAPADGPYTVSFYHQANLHAAHGGDVTLQSSAEHMHSMEGLASRFSTPRGTAKM
NKKRALSISPLSDTSIDLQTMIRTSPSSLVAFINNSHCPSNTSGSYGHLSITGISSACGF
PHSPAAPSKHQQFLIQPKGMSATFGNTQPLTHPSLPCGPRHHQPSVASLLPLSQPGRMQK
PFQMKAESLLSCTLDLLNGKCLEERSEEDVSSPASTGTQDHLLGMMDGRGDGDKEDGKQE
TESIYETNCHWEGCSKEFDTQDQLVHHINNEHIHGEKKEFVCHWQECSREQRPFKAQYML
VVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYMCEHEGCNKAFSNASDR
AKHQNRTHSNEKPYVCKIPCCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDVGIRPLAA
QDGETPYDEAHGIGAGKMEDFLQGRLMVADTIMKPQASPGDRSSSSSERSFQGSANNNDS
GVEMNANGGGSFEDLTSIEDAPCADSTVAPSAEARLRRNATALQRLAELKIGRLKQMRKP
TPPLRGANIQGSALPGEVPMCGSAAPPCHRLAEAAGKDRGARVPLPERRDSGASTVSSAY
TVSRRSSAISPYLSSRRSSEVSLAGGLGNCSGERPHDPGSPDAAPPGLPFLSPAQQYRLR
AKYAAATGGPPPTPLPAGGALSPFHGGVYRPGGHGFPQCRGGESGYEPRPHYGPGLSVRR
ASEPVRPAADSQSMPKVQRFNSLSNVGPTAIAIATASAPGSCRLAHPAASDTNSHPHLYS
PRPPSITENTMMEVGHMAHYQHCQGPIMPPLNDQLCSTQSAQLHSPGRLHHPSLYANTGN
RQVGIAHQAMADGSVSQQHYIVDQTQMRECNAQFQTQRQGCPHENHMPVQWSEVSPGSMD
IAAIQMPAQRGIEPSPAHPSQCLKQVNHRSPSSPHSMPYIQHNMNVTPSPLCQQSTFGTG
QRAQPGHQQQVKPEHQFHQPVPMLNPCQNTKQQAMGSGQDFILPKAAMPAAAECVRRDCC
QPAGTLCSPLREGRWGGGARTPMMQVKEMMVRNYVQSQQALMWGEAPRSPPPHSPRAQCQ
PYAGYADCQGHGMAPHPPPAQKLPRRQTAEREFLPHVSPVHKPAAPIDLPPIHCPLEAPQ
DASLLYSSPMQIQQARPHLRKMAANSMHLHSSQGSCALQQQQEQQEMMLDLDPMKLASPL
YMESLGLEHSIDFAAIVNEPCDGPLSPGTVPASPCLATPCRASGLQAGMSNMAISDMSSV
LTTLAGQSRFANAMP
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgctgcctcgcgcggtggccgtggcggaggggaaggcggcggacgatggcggt
ggatggagggcgtgcggcaggaggtcgccgcagcccagcgctgcaggccgcggtgcccag
caacattactcggcttttcaagcctcgatgccagccgattctttgctccatgactgtggc
aatctctacgaccccagcgtccctcaaactgtgcgggggtgtgctccgtcggacggcccg
gctcactccgacatccctttcggccacgtggagggccacgccgggtgtgccgccctccac
cacctcccgagtccgtatgtggaccatcagctccggcccggccaggggcagtgtgccagc
ctacccgctccccacccgctggcaccagctgatgggccttacactgtgagcttctaccac
caagccaacttacacgctgcccatggcggggatgtcacactgcagtcctctgctgagcac
atgcactccatggagggtctggcgtccagattctcgactccgcgcggtaccgcgaagatg
aacaagaagcgggccctgtcgatctcacccctgtccgacaccagcatcgacctacagacc
atgatccgtacctcacccagctccctggtggccttcatcaacaactcgcactgcccctcc
aacaccagcggttcctacggacacttatccatcacgggcatcagctcagcgtgtggattt
ccccattctccagcggctccctccaagcaccagcagttcctcattcagcccaaagggatg
tccgccacgtttggcaacacgcagcctctgacccacccctctctgccgtgtggcccccgg
caccaccagccctccgtggcatcactcctgccgctctcacagccaggccgcatgcagaag
cccttccagatgaaagcggagtcgttgctcagctgtacattggatctgctcaatgggaaa
tgcttggaggagaggtctgaggaagatgtctccagcccggcctctacaggcacacaggac
cacctgctgggaatgatggacggaaggggagatggagataaggaggatggtaaacaggag
acggagagcatctacgagaccaactgccactgggagggatgcagtaaagagttcgatact
caggaccagcttgtgcaccacattaataacgagcacattcacggcgagaagaaggagttt
gtctgccactggcaggagtgttcgagagagcagagaccgttcaaggcccagtacatgttg
gtggtccacatgaggcgacacacaggcgagaagccacataaatgtacatttgaaggttgc
aacaaggcctactcccggctggagaacctgaagacccacctgcgctcccacactggggag
aaaccctacatgtgtgagcacgagggctgcaacaaagctttctccaacgcctccgatcga
gccaagcaccagaacaggactcattccaacgagaagccatacgtgtgcaagatcccgtgt
tgcaccaagcgctacacggaccccagctcgctgaggaagcacgtgaagaccgtgcacggt
ccagaggctcacgtgaccaagaagcagcgcggagacgttggcatcaggccgctggcggca
caggacggagagaccccgtacgacgaagctcacggtattggcgccgggaagatggaggac
ttcctgcaggggcgcctaatggtggccgacacgatcatgaagccccaggccagccctggc
gatcgctcatcgagcagcagcgagaggtcgtttcagggcagcgccaacaacaacgacagc
ggagtggagatgaacgccaacggcgggggcagcttcgaagacctgaccagcatcgaagac
gcgccgtgcgccgattccacggtggccccctcggcagaggccaggctgcggcgcaatgcc
acggcgctgcagcggctggccgagctgaagatcgggaggctcaagcagatgcgcaagccc
acgccgccattgcggggagcgaacatacagggcagcgctctgcccggcgaggtgcccatg
tgcggatcagcggctccaccgtgccaccgactggcggaagcggcgggcaaggatcgcggg
gcgagggtgccgctgccggagcggcgggacagcggcgccagcacggtcagctcggcctac
accgtcagccgccgctcgtcggccatttccccgtacctgtccagccgccgctccagtgag
gtgtccctggcgggcggcctcggcaactgcagcggcgaacggccgcacgaccccggctct
ccggacgccgcgccgccggggctgccgttcctctctcccgcccagcagtaccgcctgagg
gccaagtacgccgccgccaccggcgggccgccgcccacccccttgcccgcggggggcgcc
ctctcccccttccacggcggagtctaccgccccggcgggcacggcttcccgcagtgccga
ggcggcgagagcggctacgagcccaggccgcactacgggccggggttgagcgtgaggcgg
gcgagtgagccggtgcggccggccgccgattcgcagtcgatgcccaaggtgcagcgcttc
aacagcctcagtaacgtgggccccaccgccatcgccatcgccaccgcctcagcaccgggc
agctgccgcctggcgcaccctgccgcctccgacaccaactcccacccccacctctactcc
ccacggccgcccagcatcactgagaacaccatgatggaggtgggacacatggcgcactac
caacactgccaaggccccattatgcctcccttaaacgaccagctctgcagcacacagtcg
gcacagctccacagcccagggcgattgcaccatccgagtctctatgccaacacggggaac
aggcaggttggcattgcccatcaggccatggcagacggcagcgtctctcagcagcactac
attgtggaccagactcagatgagagagtgcaatgcacagttccagacccagcgacagggc
tgtcctcatgagaaccacatgcccgtccagtggagtgaagtcagtccgggcagcatggat
atcgctgccattcagatgcccgcccagcgtggcattgagccaagcccagcccatcccagc
cagtgccttaagcaggtcaaccacaggtcaccttcgtccccgcactccatgccctacatc
caacacaacatgaacgtgacccccagccccctgtgccagcagagcacgttcggtaccggg
cagcgggcacagcctgggcaccagcagcaggtgaagcccgagcaccagttccaccagcct
gtgccaatgctaaacccctgccaaaacaccaagcagcaggcaatgggaagcgggcaagac
ttcatcctgcccaaggccgcgatgcccgctgcggcagagtgcgtgaggcgcgactgctgc
cagccagcgggcacgctgtgctcgccgctgcgggagggcaggtggggcggcggtgcccgc
acgcccatgatgcaggtgaaggagatgatggtgcggaactacgtgcagtcgcagcaggcc
ctcatgtggggcgaggccccgcgcagcccccctccgcacagcccgcgggcacagtgccag
ccctacgcgggctacgccgactgccagggtcacgggatggcgccgcaccctcccccggcc
caaaagctgccacggaggcaaacagccgagagggaattcctgccgcacgtcagccccgtc
cacaagccggcagcgcccatcgatctcccccccatacactgcccgctggaggcaccgcaa
gatgcttcgctgctttactccagccccatgcagatccagcaggcaaggccgcacttaagg
aagatggcggccaactcgatgcatctgcattcatcgcaaggcagctgcgctctccagcag
cagcaggagcagcaggagatgatgctggacttggaccccatgaagctcgcctcgcccctc
tacatggagtcactgggcctcgagcattcgatcgactttgcggcgatcgtgaacgagccg
tgcgacgggcccctcagtcccggcaccgtcccagcgtccccgtgcctggccaccccctgc
agggcgagcgggctgcaggcggggatgtccaacatggccatcagcgacatgagctcagtg
ctcaccaccctggcagggcagagcaggtttgccaatgccatgccgtga
DBGET
integrated database retrieval system
