Leucoraja erinaceus (little skate): 129714660
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Entry
129714660 CDS
T09122
Name
(RefSeq) sodium channel protein type 8 subunit alpha-like isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129714660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
leri04040
]
129714660
Ion channels [BR:
leri04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129714660
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FraC
ATP-synt_B
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
129714660
NCBI-ProteinID:
XP_055520363
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All DBs
Position
40:870858..1009229
Genome browser
AA seq
1855 aa
AA seq
DB search
MIIMATILTNCVFMTFSKPPDWSKQVEYTFTGIYTFESLVKMIARGFCIDSFTFLRDPWN
WLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVM
ILTVFCLSVFALIGLQLFMGNLRHKCVIWPPSPADFNATDENGTRLFDFREYIMNETNFY
TLAGIPDALLCGNGSDAGQCPEGYICMKAGKNPNYGYTSFDTFGWAFLALFRLMTQDYWE
NLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEQEFK
QMLEQLKRQQEDALMAAAAATSAGTVSEDALDEEEEGQMSQSSSELSKLSSKSAKERRNR
RRKRKQTRGHSEGEEKGDHEKILKSESENGISKRARHLAHGMKYPMNQSQLSILGSPNLT
RFDSKSSIFSIRDRKEPSSETEFADDEHSTVEETDGNRKNSLFVPNKEPYRRNSYSGYSQ
PSKSSKMFPVLPVNVKRNSTVDCNGVVSLIGGPGANMPGGRLLPEVIIDKAATDDSPITE
IESKKKLSGSLLVSMDQLNASFGRKDRANSVLSVLTNTLEELEESQRKCPPCWYKFSNMF
LIWECSPNWLKLKQHLHLFVFDPFVDLTITICIGLNTLFMAMEHYPMTEQFEHVLFVGNL
VFTAIFTLEMVMKLIAMDPYYYFQEGWNIFDGFIVSLSLMELGLANVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKINK
DCILPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLVVFMMVMVIGNLVVLN
LFLALLLSSFSADNLAATDDDGEINNLQLSIIRIKKGIAFMKIYSHEFVQKHFKSKDADE
AKPLDELIDKKVNYIGNHMGADINREMDYQKNGNGTTSGIGSSVEKYIIDDDHNSFIHNP
NLTVRVPIAVGESDFENLNTEDFSSESEVGGSKEKLDDTSSSEGSTIDIKPEGDEGPPVE
QPEEYLDPEACFTDGCVARFKCCQVSIEEGWGKPWWTLRKTCFLIVEHNWFETFIVFMIL
LSSGALAFEDIYIEQRKTIRIILEYADQIFTYIFILEMLLKWVAYGFQKYFTNAWCWLDF
LIVDVSLVSLVANALGYSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMN
VLLVCLIFWLIFSIMGVNLFAGKYYFCFNETSEYRFLPTEINNKSECEGLMTPSNDEVRW
KNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKVEEQPFYEDNIYMYIYFVIFII
FGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPSKPIPRPLN
IIQGGVYDFVTQQVFDIVIMILICLNMVTMMVETDEQSKDSEMILYWINFIFIIFFTSEC
VLKLFALRHYYFTIGWNIFDFVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILR
LIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKKEDGIDDMFNFE
TFGNSMICLFQVTTSAGWDGLLLPILNRPPDCDLHKENPGTAVKGDCGNPSVGIFFFVSY
IIISFLIVVNMYIAIILENFSVATEESAEPLSEDDFETFYEIWEKFDPDATQFIEYNKLS
DFADTLEAPLRVPKPNHIELIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDVLRQQM
EERFVASNPSKVSYEPITTTLRRKHEEVCAIIIQRAYRVHLARRKISTKGRLPYSKPGGH
ANENGNTNQEKKEGTPSTASLPSYDSVTKPEKQEKDRKGNDKGRSNQKDIRESKL
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgattattatggccactattttgaccaactgtgtattcatgacctttagtaaaccccca
gactggtccaagcaggtggaatacacatttaccggcatttacacctttgaatctcttgta
aaaatgattgccaggggattctgcatagatagctttacctttcttcgagacccatggaat
tggttggatttcagtgtaataatgatggcatatgtgacagagtttgtggaccttggaaat
gtctcagcgttgagaacattcagagttctccgagctttgaaaactatctcggtcatccca
ggtttgaagaccattgttggtgccctaatccagtctgtaaagaaactttctgatgtgatg
atcttgactgtattttgcctgagtgtgtttgccctgattggactccagttgttcatgggc
aatttaaggcataaatgtgtcatttggcctcccagtccagcggactttaatgccaccgat
gaaaatggaacaaggctgtttgactttcgcgagtatattatgaatgaaacaaatttctac
actttagcaggaattcctgatgctttgctttgtggaaacggctctgatgctggtcaatgc
cctgaaggatacatctgtatgaaagcaggaaaaaatcccaactatggctacacgagcttt
gatacattcggctgggctttcctcgccttgtttcgactcatgacgcaagactactgggaa
aatctgtaccagttgacgctacgagccgccgggaagacgtacatgatctttttcgtcctg
gtcatcttcgtgggctcgttctacttggtgaacctgatcctggccgtggtggccatggcc
tacgaggagcaaaaccaagccaccctggaggaggctgagcagaaagagcaggaattcaag
caaatgctggagcagctgaagaggcagcaagaggatgcgttgatggcggcggcggcggcc
acctctgcggggacggtctcggaggacgcgctggacgaggaggaggagggccagatgtcg
caaagctcgtcggagctgtccaagctcagctccaagagcgcaaaggagcggagaaaccgg
cgcaggaaacggaagcagaccaggggccactcggagggggaagagaaaggagaccatgaa
aaaatcttaaagtcggaatctgagaatggaatcagtaaacgggccagacatttagcacat
ggaatgaaataccccatgaatcagtctcagctgagcatcttggggtcgccgaacctcacc
cgattcgacagcaaaagcagcattttcagcatccgagaccgcaaggagcccagttcggag
acggagttcgccgacgacgagcacagcacggtggaggagacggacggcaaccgcaagaac
tcgctgtttgtccccaacaaggagccctaccgacggaacagctacagcggctacagccag
cccagcaagtcgtccaagatgttcccagtgctgccggtcaatgtgaaaaggaacagtact
gtggactgcaatggtgtggtctcccttatcggtggccctggagccaacatgcctggtgga
cgtctactgcctgaggtgataatagataaggcagctaccgatgacagtccgatcactgaa
atcgagagcaaaaagaaactgtcgggctccctcctggtgtccatggaccagttgaacgca
tcgttcgggaggaaagatcgtgcgaacagcgtgttgagcgttctgacaaacacgctggaa
gaactggaagagtctcaaaggaaatgccctccctgctggtataagttttccaacatgttt
ctgatctgggaatgttcccccaattggttgaagctcaaacagcacctccacctctttgta
ttcgacccatttgtggacttaacgatcaccatttgtatcggactcaacaccctcttcatg
gcgatggaacattacccaatgacggagcaatttgaacatgttttgttcgtgggtaacctg
gtcttcactgcaatcttcacactcgaaatggtaatgaagttgatcgcaatggacccgtac
tattacttccaggaaggatggaacatctttgatggattcatcgtgtcgctgagtttgatg
gagctgggtctagcgaatgttgaaggattatcggtgctcaggtccttccgactgttgcga
gtcttcaaattggcaaagtcgtggcccacgctgaacatgttgattaagatcatcggcaac
tctgtgggcgctctgggtaacctgaccctggtcttggcgatcattgtcttcatctttgcc
gtggtgggcatgcagctgttcggcaagagctacaaggactgtgtctgtaagatcaacaag
gactgcatcttgccgcgctggcacatgcacgacttcttccactccttcctcatcgtcttc
cgcgtcctgtgcggcgaatggattgagacgatgtgggactgcatggaggtcgcgggccag
agcatgtgtctcgtcgtattcatgatggtcatggtgattggcaatcttgtggtgctgaac
ctgttcctggccctgctgctgagctcgttcagcgcggacaatttggcggcgacggacgac
gacggcgaaatcaacaacctgcagctgtccatcatccggatcaagaaggggatcgccttc
atgaagatctacagccacgagtttgtccagaagcacttcaagagcaaggacgcggacgag
gccaagccgctggacgagctgatcgacaagaaggtgaactacatcggcaaccacatgggc
gccgacatcaaccgcgagatggactaccagaagaacggcaacggcaccaccagcggcatc
ggcagcagcgtggagaagtacatcatcgacgacgaccacaactccttcatccacaacccc
aacctgaccgtccgggtccccatcgctgtgggcgagtccgactttgagaacctcaacacg
gaggacttcagcagcgaatctgaagttggcggcagcaaggagaagctggacgacacaagc
tcatcggaaggaagtaccatcgacattaagcctgaaggggacgaaggaccaccagtggaa
cagcccgaagagtacctggaccctgaggcctgtttcacggatggttgtgtggctcgcttt
aagtgctgccaggttagcatcgaggaaggctggggcaagccatggtggactctacgaaag
acctgctttttgatagtggagcacaactggttcgaaaccttcatcgtttttatgattctg
ctcagtagcggtgcgctggcctttgaagatatttacatcgaacagcggaagacaattcga
atcatcctggagtatgccgaccagatcttcacgtatatctttatccttgagatgttgctg
aaatgggtggcctatggatttcaaaagtacttcaccaatgcgtggtgctggctggacttc
ctcattgtggatgtctccctagtcagcctcgtagctaatgccctgggctactccgatcta
ggtgccattaagtctcttaggacactaagagctctgagacctctaagagccttgtcacga
tttgaagggatgagggtcgtggtcaatgccttggtgggtgccatcccgtccatcatgaat
gtactgctggtgtgtctcatcttctggctcattttcagcataatgggagtgaaccttttt
gctgggaagtattatttctgttttaacgaaacctcagaatacaggtttctcccgactgaa
atcaacaacaagtctgaatgtgagggtctgatgaccccgtctaatgatgaagtccgttgg
aagaatgtgaagatcaacttcgacaatgtaggagcgggatacttagctttgctgcaagtg
gccaccttcaaaggctggatggatatcatgtacgctgccgttgactcccgaaaggttgaa
gagcagcccttctacgaagacaacatctacatgtacatctattttgtgatcttcatcatc
ttcggatcattcttcacattaaacctcttcattggcgtcatcattgacaacttcaatcag
cagaagaaaaagtttggaggtcaggatatcttcatgacggaagaacaaaagaaatattac
aacgccatgaaaaagctgggatccaagaagccctcgaaacccattccgcggccactgaac
ataatccagggcggagtctatgattttgtcactcagcaagtttttgatattgtgatcatg
attctgatctgcctgaacatggtgacaatgatggtggaaactgatgaacagagcaaagac
agtgaaatgattctatattggatcaattttatcttcatcatttttttcacaagcgaatgt
gtgcttaaactctttgccctaaggcattactatttcaccattgggtggaatatatttgat
tttgtggttgtgatcctttccattgtaggaatgttcctggctgatataattgaaaaatac
tttgtatcaccaacacttttccgagttattcgattagcgcgaattggccgtattttgcgc
ctaatcaaaggagccaaagggatccgaacactgttgtttgccttaatgatgtctctgccg
gccttgttcaacattggcctcctgctctttctggtcatgttcatcttctccatctttgga
atgtctaactttgcctacgtcaagaaggaagacggcatcgatgatatgtttaactttgag
acctttggcaacagcatgatctgcctgttccaagtgaccacgtcggccggttgggacggc
ttgctcttgcccatcttgaaccgcccgccagattgcgacctccacaaggagaaccccggc
acggcggtcaagggcgactgcggcaatccgtcggtggggatctttttctttgtcagctac
atcatcatctcctttttgatcgtggtgaacatgtacattgccatcatcctggagaacttc
agcgtggcgacggaggagagcgcagaaccgctcagcgaggacgactttgagacattctat
gagatctgggagaaatttgacccggacgccacgcagttcatcgagtacaacaagttgtcc
gacttcgccgacactttggaagcgccgcttcgggtgcccaagcccaaccacatcgaactc
attgccatggacctgccgatggtgagcggagataggattcactgcctggacatcttgttt
gcgtttaccaagcgcgtgctcggcgagagcggcgaaatggacgtgctgcggcagcagatg
gaggagcgcttcgtggcatcgaacccctccaaggtgtcctacgagcccatcaccaccacg
ctgcggcgcaagcacgaggaggtgtgcgccatcatcatccagcgggcgtaccgggtgcac
ttggcgcggcgaaagatcagcaccaaggggcgactcccgtactccaagcccgggggccac
gccaacgagaacggcaacaccaaccaagagaagaaggaagggacgccctccacagcttcg
ctgccgtcgtacgacagcgtaacaaagccggagaaacaggagaaggaccggaaaggcaac
gacaaaggcagaagcaaccaaaaagacatcagggaatctaagttgtga
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