Leucoraja erinaceus (little skate): 129714671
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Entry
129714671 CDS
T09122
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04145
Phagosome
leri04814
Motor proteins
leri05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129714671
09142 Cell motility
04814 Motor proteins
129714671
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129714671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
leri03036
]
129714671
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
leri04812
]
129714671
Chromosome and associated proteins [BR:
leri03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
129714671
Cytoskeleton proteins [BR:
leri04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
129714671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Dynein_IC2
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
129714671
NCBI-ProteinID:
XP_055520388
LinkDB
All DBs
Position
40:complement(2648223..2679453)
Genome browser
AA seq
719 aa
AA seq
DB search
MPEAGKNERRGFWVQVRSGRCESAVGTAARGARRDDMSPEAGAAGAGSRERQKHLPSPHT
YTCSQQRCATMADKSELKAELERKKLRLAQIREEKKRKEEEKKKKDGDFKKEIPSASQAE
LDLERKRKETEALLQSIGITTEPSMVQPLRTVTGDTCLFNYLVHSPISPSNKSLGTPSES
ESQESVEGAVGARTLQWDTDLSVLQLQTDSEMRHHLQKLGIARITHVDIAPCERLAHCKE
TQTPVVAKPDEEKQESMVPATALTEAETETTEEPQEEREEGHQVSRHELTEDEKENILQS
DSFRSFFDQTSRVIEQALTEHVDIFFDYSGRNLDDKEGEVQAGAKLSLNRQFYDENWSKN
RVVTCLDWSQQYPELLVASYTNNEDALNEPDGVALIWNMKFKKTTPEYIFHCQSKVMSAC
FAQFHPNLMVGGTYSGQIVLWDNRSNKKTPVQRTPLSAAAHTHPVYCVNVVGTQNAHNLV
SVSTDGKLCTWSLDMLSQPQDSIELVHKQSKAVAVTSMSFPLGDINNFVVGSEEGSVYTA
CRLGSKAGIIEMFEGHQGPVTGIHCHTAAGAVDFSHLFITSSFDWTVKLWSTKSNKSLYS
FEDSSDYVFDVMWSPIHPALFACVDGMGRLDLWNLNEDSEVPTASVTMEGNPALHRVRWA
QSGREIAVGDSEGQVLIYDVGEQIAVPRNDEWSSFAQTLVDLKANGNDAEEDATTGLLA
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagccggcaagaatgagagacgagggttttgggtgcaagtgcgatctggacgc
tgcgaatctgcagtgggcacggctgcgcgcggcgcacgccgggatgacatgagcccagaa
gctggtgctgcgggtgcaggcagtcgtgagagacagaagcatcttccttccccacacaca
tatacatgttcacagcaaaggtgtgctactatggcagacaagagtgaactcaaagctgaa
ctggaacggaaaaagctacggctagcacagatcagagaagaaaaaaagagaaaagaggag
gagaagaaaaagaaagatggtgatttcaagaaagagatcccttctgcttcacaggctgag
ttggatctggagagaaagcgtaaagagactgaagcattacttcagagcattggcataacg
acagagccctccatggtgcagccactgcggacagtaactggagacacctgtttgttcaat
tatttagtccattctcctatttccccatcgaacaaatcgctgggaacgccaagtgaatct
gagagccaggaatctgtggagggcgcagttggagcccggacgctgcagtgggatacagat
ctatctgtgcttcaacttcagactgattctgaaatgcgacatcacctgcaaaagttggga
atagccagaattacccatgtggatattgcaccctgtgaacgtcttgcgcactgtaaggaa
acacagacaccagtggtcgctaaaccagatgaagaaaaacaggaatcaatggttcccgcg
acagctttaactgaagcagagactgaaacaactgaggaaccccaagaggagagagaggaa
gggcatcaagtgagcagacatgaactgaccgaggatgaaaaggaaaacattcttcaatct
gattcatttcggtccttctttgatcagacctcaagggtgattgagcaagcacttactgaa
catgttgacatcttctttgactacagtgggcgcaatctcgatgacaaggaaggagaggtc
caagcaggagctaagctgtcactgaacaggcagttttatgatgaaaattggtccaagaat
cgcgttgtcacctgtctggattggtcacagcagtatcctgaattactggttgcatcatac
actaacaatgaagatgctttgaatgaacctgatggtgtagcccttatatggaatatgaag
tttaagaagaccactccagagtacatctttcactgccagtcaaaagtcatgtctgcctgc
tttgcacagtttcatccaaatcttatggtgggtggaacatattctggtcagattgttctt
tgggataatcgcagtaacaagaagacgcccgtccagcggactccactgtccgctgcagct
cacacgcatcctgtgtactgtgtcaatgtcgttggcactcagaacgctcataacttggtc
agcgtttccactgatggaaaactgtgtacctggagcctggacatgctgtctcagccacag
gatagtattgagctggtacacaagcaatcaaaggcagtggctgtaacgtccatgtccttc
cctctgggggatatcaataactttgtcgtgggcagtgaagaaggctcagtgtacacagct
tgtcgccttggcagcaaagctggaatcattgagatgtttgaaggacaccagggtccagtg
acagggatccattgtcacacagcagcaggagcagtggacttctctcatctctttatcact
tcatcatttgactggactgtgaagctttggtcaactaagagcaacaagtccttgtattcc
tttgaggacagttccgactatgtgtttgatgtcatgtggtctcctatccacccggcactc
tttgcctgcgttgatggtatgggtcgactcgatctttggaatttgaatgaagattctgag
gttcccactgcaagcgtcaccatggagggaaaccctgcgttgcatcgtgtgcgttgggcg
cagtcaggacgagagattgcagtgggagattcagaaggccaagtgttgatttatgacgtt
ggcgagcaaattgccgttccacggaatgacgaatggagcagttttgcccaaacgctggtt
gacctgaaggcaaatgggaatgatgcagaggaggatgctacgacaggtctccttgcataa
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integrated database retrieval system
