Leucoraja erinaceus (little skate): 129714708
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Entry
129714708 CDS
T09122
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129714708 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129714708 (ube3c)
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129714708 (ube3c)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
HECT type E3
129714708 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Fin
DUF3335
Motif
Other DBs
NCBI-GeneID:
129714708
NCBI-ProteinID:
XP_055520453
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All DBs
Position
2:117693604..117833318
Genome browser
AA seq
1092 aa
AA seq
DB search
MFSFEGDFKTRPKVSLGGASRKEEKASLLHRTQEERRKREEERRRQRNAVIIQSFLRGYR
DRKEQHSIQRSEFDHYVSIAQAGGHFPISDGFNLTVLIRKLLFFYKQNNDLDRLTWMCQS
LVKHGSLYVQQLIDSNKQICLYQIKCLLGLCCRLLKSCNNESLNVTVPLRMLEIFSSEKT
YLPVIQDVNSVTSIVEQILHYMVQKGYYKSLYMLMNHRLPSSLEYSDVSRASRVPLAITL
LENFLKPLHFQYASCPEGSRHQVFAILAKEFFTAPFTDQIFNFLVPALSAARISFPYVPF
LTALLIPKTTSSVGLAYTRDMAPWLLYFVLAVGEPQIAILSEEGMLVYLRMLQILLPQLP
VSLTGTNGREIGSDSENEEEEERKMITNKGNGRISVNLITAECLKKLDTKQQTNALLNLV
WRESVSEDVFTMMASICHTLMVQHRMMVPKIRLLYSLAFNARFMRHLWNLITSVTTKMIT
GSMVPLIHLISRGSPMSLEDSHRIIPLFYLFSSLFSHSLISIHDTEFFGEQAQGGVGQQP
VTMMPFTLRELVTLSRCLRDACLGIIHLAYPETKPEVREEYIVAFKSIGVRTNAEMQERI
ETERKRWIQLFKVISNLVKMLKSRDTRRQFCPPDHWLSDQVNIRADKVTQLYVPSARHVW
RMRRMGRIGPLQSTLDVGQEPAQLSVTEERHLAILTELPFVVPFEERVKIFQRLIFADKQ
EVQGDGPFLDGINVTIRRNYIYEDAYDKLSPENESDLRKRIRVHLLNAHGLDEAGIDGGG
IFREFLNELLKTGFNPNQGFFKTTNEGLLYPNPAAKMLVGDHFTRHYYFLGRMLGKALYE
NMLVELPFASFFLSKLLGTSADVDIHHLASLDPEMYKNLLFLKSYEGDVEELGLNFTVVN
NELGEAQVVELKLGGKDIPVNSANRIAYIHLVADYRLNKQIRPHCLAFRQGVANVVNLEW
LRMFDQQELQVLISGAQIPIDLEDLKNFTNYSGGYTADHAVIKIFWNVVENFTNDEKRKL
LKFVTSCSRPPLLGFKELYPAFCIHNGGTDLERLPTASTCMNLLKLPEFYDESLMRSKLL
YAIESAAGFELS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgaaggtgatttcaaaacacggcccaaggtttctcttggtggagcaagc
aggaaggaagaaaaagcttcattgttgcatcgaacccaggaagaaagacgaaagcgagag
gaagaaagacgaaggcagaggaacgcagttatcattcaatccttcctccgtggatataga
gaccgaaaagagcaacattcgatacaacgaagtgaatttgatcactacgtctccattgca
caagcaggcggacattttcctatcagtgatggatttaatttgactgttttaataaggaag
ctcttatttttttacaaacaaaataacgatttggatagattgacatggatgtgtcaaagt
ttggttaaacacggtagtttgtatgtgcagcagctaattgattctaataaacaaatatgt
ttatatcaaataaagtgcttattgggtttatgttgcagattactgaagagctgtaacaat
gagtctttgaatgttactgtgcctttgcggatgttggagattttttcctcagaaaaaaca
tatttgcccgttatacaggatgttaacagtgtaacatcgatagttgaacaaattttgcac
tacatggttcagaaagggtactataaatcactttacatgctgatgaatcataggcttcca
tcaagtttagaatattctgatgtttcacgggcttcacgtgttccacttgcaattacactg
ttagagaattttctgaagccactgcactttcaatatgcctcgtgccctgaaggttcaagg
catcaggtttttgctatattggcaaaagagtttttcactgcaccattcacagaccagatc
ttcaacttccttgttccggcactttctgctgcaaggatttcgtttccttatgtacctttc
ttaaccgcactgttaataccgaagacaacctcgtcagtgggactcgcttataccagggat
atggcaccttggcttctttacttcgttcttgctgttggagaaccacagatagcaattctg
tctgaggaaggcatgcttgtttatctgaggatgctgcagattcttttaccacagttaccc
gtctccttgactgggacaaatggcagagaaattgggagcgactcggagaacgaagaggag
gaggagcgtaagatgataaccaacaagggcaatggtagaatttcggtgaatttaattact
gccgagtgtctcaagaagctggacactaaacaacaaacaaatgccttgctaaacctggtt
tggagggaatctgtaagtgaagatgttttcactatgatggcgtccatctgtcacacactg
atggtacaacacagaatgatggttccaaaaatcagacttctatacagtttggcattcaat
gcaagattcatgcgacatctttggaatttgatcacatctgtaacaacaaaaatgataacg
gggtcgatggtacctttgattcatctgatctcacgaggctctccgatgtcacttgaagac
tctcatcggatcatacctctcttttatctctttagttctctcttcagccattcccttatt
tcaatccatgacaccgaattctttggagagcaagctcaaggaggtgtgggccaacagcca
gttacaatgatgccattcactttaagagagttggtaacattatcccgctgtctccgtgat
gcttgccttggaataattcatttggcatatccagaaaccaaaccagaggttcgtgaagag
tacattgtggcatttaagagcattggtgtccgtaccaatgcagaaatgcaagaacgaatc
gagactgagaggaaaagatggattcaactctttaaggtgatctccaatttagtgaaaatg
cttaagtcaagagacacaagaagacaattttgtcctcctgatcactggctttctgatcaa
gttaatatcagagctgataaggtcacccaactctatgtgccctcagccaggcatgtttgg
aggatgcgtcgaatgggaaggataggaccattgcagtcaacactagatgttgggcaggag
ccagctcaattgtcagtaacggaagaacgtcatcttgccatattgactgaactacccttt
gtcgttccatttgaagaaagagtaaagatcttccaaagattgatctttgctgataagcag
gaagttcaaggggatgggccatttttagacgggatcaatgtcacaattcgacgtaattat
atctatgaagatgcatacgacaagttgtcaccagaaaacgaatctgacctgagaaagcga
atacgcgttcacttattaaatgcgcatggtttggatgaagctggaattgacggtggagga
atattcagagagtttcttaatgaactgctgaagactgggtttaacccaaaccagggattt
ttcaaaacaacaaatgaagggctactgtatccgaatcctgcagctaaaatgctggttggg
gatcacttcaccaggcattactattttctcggaagaatgttaggaaaggccctatacgaa
aacatgttggtagagcttccttttgccagtttctttctgtcaaaactcttgggcaccagt
gcagatgttgacatccatcaccttgcctcactggatcctgaaatgtacaaaaacctgctc
tttctgaagagctatgaaggtgacgtcgaagaacttggtctcaattttactgtggtaaac
aatgaacttggggaggcacaggtggtggaactgaaactaggtggaaaggatattcctgtg
aacagtgccaacaggatagcttacatccatctcgttgctgactacaggcttaacaagcag
attcgaccacactgccttgcattcagacagggtgtggcaaatgttgtgaacttggagtgg
ctgaggatgtttgaccaacaagagcttcaggttttgatatctggagcgcaaataccaatc
gacttggaggacctgaaaaatttcaccaactattcaggtggctacacagcagaccatgca
gttattaaaatattctggaatgtagtcgaaaatttcacaaatgatgaaaagcgaaaacta
ctgaagtttgtcacaagttgctcccgaccaccgttgctgggattcaaggaattatatcca
gctttttgtatacacaatggagggacggatctggagcgtttaccaaccgccagtacttgc
atgaaccttctgaaacttccagaattttatgatgaaagtcttatgaggagtaaattactt
tacgcaattgaatcagcagcaggctttgagctaagttga
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