KEGG   Leucoraja erinaceus (little skate): 129715038
Entry
129715038         CDS       T09122                                 
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129715038 (exosc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:leri03019]
    129715038 (exosc4)
Messenger RNA biogenesis [BR:leri03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     129715038 (exosc4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     129715038 (exosc4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 129715038
NCBI-ProteinID: XP_055520849
LinkDB
Position
2:122733978..122738272
AA seq 245 aa
MAGLELLSDQGYRVDGRKPAELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
GRSKALHDKAAVNCQYSMATFSTGERKRRPHGDRKSTEMTLHLKQTFEAAILTQLYPRSQ
IDIYVQILQADGGNYCACVNAATLAVVDAGIPMRDYVCACSTGFLEDTPLTDLSYVEESA
GGPQVALALLPKSEQIALLEMNSRLHQDHLEKMVDAAVKACRDVYAVLDRVVREHVLEVT
SLAGE
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcgggcttggagctgctctcggaccagggttaccgggtggatggcaggaagccggcc
gagctgaggaagatacgggcccgcatgggcgtattcgcccaggccgacggctccgcttac
atcgagcagggcaacaccaaggcgctggccgtggtgtacggcccgcatgagatccgcggt
gggcgtagcaaggccctccatgacaaggctgcagtcaactgccagtacagcatggccacc
ttcagcactggcgagaggaagaggaggcctcatggtgaccgcaagtccactgagatgacc
ctgcacctgaagcagacctttgaggctgccatcttaacgcagctctacccgcgctcccag
atcgacatctatgtgcagattctgcaggcagacggtggtaactactgcgcctgtgtgaat
gcggcaacgttggcggtggtggacgcaggcatccccatgcgtgactacgtgtgcgcctgc
tccacgggctttctggaggacacaccgctgacggacctcagctatgtggaggagtcggcg
ggagggccgcaggtggccctggctctgctgcccaagtccgagcagatcgcccttctggag
atgaactcccgcctgcatcaggaccacctggagaagatggtggacgcggcggtcaaggcc
tgccgtgacgtctacgccgtgctcgaccgtgtggtcagggagcacgtgctggaggtcacc
tcgctggctggggagtga

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