Leucoraja erinaceus (little skate): 129715173
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Entry
129715173 CDS
T09122
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129715173
Transcription factors [BR:
leri03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
129715173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-Di19
Homeodomain
zf-C2H2_15
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
129715173
NCBI-ProteinID:
XP_055521020
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All DBs
Position
2:124524831..124703985
Genome browser
AA seq
1227 aa
AA seq
DB search
MADGPRCKRRKQANPRRKNVTNYNNVVEASSDTDDEDKLHIVEDESVTDAGECDANALDD
DLPTKCSVLPRKDDSDEENESADWRNEEGKKEDADNLGPEAQMLNDDCAAKEEGCESDGE
NCFHDSTAEDEQTHDPKVQEYLQQKDTAVIFPEAPEDQHRRATPEPSGQEENGTPDAFAQ
LLTCPYCDRGYKRLTSLKDHIKYRHEKNDDNFSCSLCRYTFAYRTQLDRHMASHKSGRDQ
RHVVTQTSGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKKRFSHSGSYSSHI
SSKKCIGLISLNGRARSGIKTPQGTSPSLSPSTNSPARTQLRHKLENSKPLQEQSAVNQI
KSEPVDYEYKTMVVTSGINCASSFQNGGFSGGTQVTTSPQSVVQAVVLPTVGLVSPISIN
LSDIQNVLKVAVLENNHVTLPSKEAGVVSSGLVQQNSHSLISSISLPLIDQDGTTKIIIN
YSLEPSQLQVLPQNLKKEIPHPANSCTNDKTPEDLTVKSEKTETSAGMSNTCLLCNECPG
GLNALHELKHYQLKTEAHSGESSITEPENLAAASVSIEENTSSDQEPLKNLLSLLKAYYA
LNAQPTSEELAKISVAVNLPLEKVKKWFEKMQTSQVPVQPSCPSSPSPDHEGVKPKQSVG
HPEPSPSGVQSNSANSETQADKLTEPQNATTPPSATAEPSGSSTPSPTPLNLSSASSRNS
QSYLNTPDSSQEDLQLEPLDLSLPRQQKEGLERPTITSVYHSSVHYVQEEPLNLSCLKKE
QTENESVDEGNSTSAKPINIAIPAVTTKLPMIVAISSPNSVPCLRPLTTLKQASVIPQVA
YTYKITNSNPSEQQQKPTQANGNHLVVVFLKDESQEMSCGGVPNTDEQNDSDSAPPRKKI
KKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHQCGICKKAFKHKHHLIEHTRLHSG
EKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREGVEQEEAGPDSLNNSEYADIRS
PTSHADSDDKDSTAREDESEKDEEEKESDEMQDNCAEEMREESDEEEADEEEADEQEADE
QEADEQEADEQEADEQEADEQEADEQEADEQEADEQEADEQEADEHEADEQEADELEADE
EEVDKQEADEQGADVEEADEQEADEEEVDKQEADEQEVDEQEVDEEEADEEEADKQGADE
ENRTDPMSDVEQENTVNSLEANSPEKM
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggccaaccccaggaggaaaaacgtt
accaactataataatgtcgttgaagcaagttcggacacggatgatgaggataaattgcat
atcgtggaggatgagagtgtaactgatgctggcgagtgcgatgcaaatgcactagacgac
gatttgccaacaaagtgttcagtgttgccaaggaaagatgactcggatgaagaaaatgag
agcgctgattggagaaatgaagagggaaagaaagaagatgcagacaacctggggcctgaa
gcacagatgctcaatgatgattgtgcagctaaggaagaaggatgtgagtctgatggcgag
aactgctttcacgattcaactgcagaagatgagcagacccatgatccaaaagtgcaggaa
taccttcagcaaaaagacacagcagtaatctttccagaagcaccagaggatcaacataga
agagccacgccagaacctagtggacaagaagaaaatggaacacctgatgcttttgcacag
ctgctcacctgcccgtattgcgatagaggatacaagcgtttgacttcactaaaagatcac
ataaaatatcggcatgagaaaaacgacgacaacttcagctgttccctctgtcgctacaca
tttgcctacagaacacaactggatcgtcacatggcttcacacaagtcaggacgagatcag
cgccatgttgtaacacagactagcggaaaccgcaaattcaagtgcactgaatgtggaaaa
gcatttaagtacaagcatcatttaaaggagcacttacgcatccacagtggagaaaagcca
tatgaatgctcgaactgcaagaaaaggttttcccactccggctcttacagctcacacatc
agcagtaagaagtgcatcgggcttatatcactcaatggcagagcccgttcaggaatcaag
acacctcaaggcacttctccatccctttctccgtcaaccaacagccctgctagaacacaa
ctccgtcataagctagaaaacagtaagcctttgcaagaacagtcggccgtaaaccaaatc
aaaagcgaacctgtggattatgagtacaaaaccatggtggtgacctctggtatcaactgt
gcaagctctttccaaaatggaggatttagtggcggtacccaggttacaacttctccccag
agcgtggttcaagctgttgtattgccaaccgttggcctggtctctcccattagcatcaat
ctaagtgacattcagaatgttcttaaagttgcagtattagaaaacaatcatgttactctc
ccttccaaagaggcaggagttgtatcttctggattggtgcagcaaaatagccattccctc
atctcatccatcagtcttcccttgattgatcaggacggaacaaccaagatcattatcaac
tacagcttagagcccagtcagctccaagtcctgccgcaaaatttaaaaaaggaaattcct
catccagcaaacagttgtacaaatgacaaaacaccagaagacctcacagtcaaatctgag
aaaacggagacaagtgcaggaatgagtaacacatgccttctttgtaatgaatgtcctggt
ggattaaatgcacttcacgagctaaagcactatcaattaaaaactgaagctcattcaggg
gagagcagtattaccgaacctgaaaacctcgctgcagcttcagtatcaatagaagagaac
acctcttcggatcaagaaccattgaagaacctgttgtcacttctgaaggcatattatgca
ttgaacgcacagccaacatccgaagagctggcaaagatttccgttgctgtgaacctgccg
ttagaaaaggtaaaaaagtggtttgagaaaatgcagactagtcaggtcccagtccagcca
tcttgtccctcttctccctcacctgaccacgagggggtcaaaccaaagcagtccgtcggt
cacccggaaccatcgccttctggcgttcaaagcaactcagcaaattcggaaacccaggcg
gacaagctgactgaacctcagaatgcaaccacgccgcccagtgcaacagcagaaccttcg
gggagtagcactccatccccgacaccgctgaacctttcctcggcatcttctcgaaattct
caaagctatctcaacacaccagacagcagccaggaggatttacagttggagcctcttgac
ctgtcgcttcccaggcaacaaaaggaagggctggaaagacccacgataaccagtgtttac
cacagcagtgttcattacgtccaagaggagcctttaaacttgtcttgcctcaagaaagaa
caaacagaaaacgaaagtgttgacgaaggaaactcaacaagtgccaaacctataaatatt
gcaattcctgcagtcaccaccaaactccccatgattgttgccatctcaagtccaaacagt
gttccatgcctcagacccctaacaacattaaagcaggccagcgtcattccacaggtggcc
tacacgtataaaataactaattcaaatccatctgaacaacaacagaaaccaactcaagcc
aacggaaatcatctcgtggttgtgttcctgaaggacgaaagccaagagatgagttgcgga
ggtgtgcccaatactgacgagcagaatgattcagactctgcgccgccacgtaagaaaata
aaaaagacggagaatggaatgtacgcctgtgatttgtgcgataaaatatttcagaagagt
agctctcttctgagacacaagtacgagcacacaggtaagcgaccacaccaatgcgggatc
tgcaagaaagctttcaaacacaagcatcatctgattgaacacacgcgactgcactctggg
gagaaaccttaccagtgcgataaatgtggcaagcgcttctcccattcgggctcctattcg
cagcacatgaaccaccgctactcctactgcaaacgggaagcagaggaacgggaaggagtg
gagcaagaggaggctgggcctgactcactgaacaacagtgagtacgcagacatcaggagc
cccacttcccacgcggactcggacgacaaggacagcactgcaagagaagacgaaagcgag
aaggacgaggaagagaaggaaagcgacgaaatgcaagataattgtgcagaggaaatgagg
gaggaatcagatgaggaggaagcagacgaggaggaagcagacgagcaggaagcagacgag
caggaagcagacgagcaggaagcagacgagcaggaagcagacgagcaggaagcagacgag
caggaagcagacgagcaggaagcagacgagcaggaagcagacgagcaggaagcagacgag
caggaagcagacgagcatgaagcagacgagcaggaagcagacgagctggaagcagatgag
gaggaagtagacaagcaggaagcagacgagcagggagcagatgtggaggaagcagatgag
caggaagcagatgaggaggaagtagacaaacaggaagcagacgagcaggaagtagacgag
caggaagtagacgaggaggaagcagacgaagaggaagcagacaagcagggagcagatgag
gaaaatagaacagacccaatgagcgatgtggagcaggaaaatacagtaaatagtttggaa
gctaattcaccagaaaaaatgtaa
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integrated database retrieval system
