KEGG   Leucoraja erinaceus (little skate): 129715287
Entry
129715287         CDS       T09122                                 
Name
(RefSeq) integrin beta-1-B-like
  KO
K05719  integrin beta 1
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03271  Virion - Rotavirus
leri04145  Phagosome
leri04510  Focal adhesion
leri04512  ECM-receptor interaction
leri04514  Cell adhesion molecules
leri04530  Tight junction
leri04810  Regulation of actin cytoskeleton
leri04820  Cytoskeleton in muscle cells
leri05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    129715287
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129715287
   04514 Cell adhesion molecules
    129715287
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129715287
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129715287
   04530 Tight junction
    129715287
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129715287
   04810 Regulation of actin cytoskeleton
    129715287
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    129715287
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:leri04131]
    129715287
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:leri04147]
    129715287
   04515 Cell adhesion molecules [BR:leri04515]
    129715287
   04090 CD molecules [BR:leri04090]
    129715287
Membrane trafficking [BR:leri04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    129715287
Exosome [BR:leri04147]
 Exosomal proteins
  Proteins found in most exosomes
   129715287
Cell adhesion molecules [BR:leri04515]
 Integrins
  Integrin beta subunits
   129715287
CD molecules [BR:leri04090]
 Proteins
  129715287
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 129715287
NCBI-ProteinID: XP_055521127
LinkDB
Position
2:complement(125641340..125709153)
AA seq 797 aa
MDLKCILCTVLICCGCWQGLAQSDTSECLKANAKSCGECIQAGKNCGWCTKSKFLQQGEP
NSARCDDIQSLKKRGCAMDEIENPKGSQTITANKELTGRRSSGKIKLEDITQIRPQKLTL
KLRSGEPQTFSLTFKRAEDYPIDLYYLMDLSFSMKDDLENVKKLGTELKNEMQKITSDFR
IGFGSFVDKTVMPYISTTPAKRKNPCPNGEICTSPFSYKNVLPLTNDGSKFNDLVSNQTI
SGNLDSPEGGFDAIMQVAVCGEKIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLNTNGLYTMSDYLDYPSIAHLVQKLSENNIQPIFAVTEDFKGVYKELHNLIPKSEVGVL
SSNSSNVIKLILDAYHALSSEVILENNKLPEGLSVQYTAFCKNNTVHTGENGRKCLGIQI
GDEVSFNISITAIKCPNKGEKNTLEIKPLGFTEKVEVTLEYICECDCHKKGLPNSQECHQ
GNGTFECGACRCNKGRIGSTCECSTDEVNNEDMDASCRKDNTSLICGDNGDCICGECVCK
KRVNTDEIISGKYCECDNFNCDRAGGFICGGNGICKCKICECFPNFTGNACDCSLDNSTC
ISKNGQECNGRGKCECGRCKCTDPKFQGSACEMCPTCPGVCTAHRDCVQCKAFQKGPKKD
TCDQCEFKVILVDKQDELPQPGQVPSIAHCKEKDENDCWFYFSYSVNDQNVPEVHVTKNA
ECPQAPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENP
IYKSAVTTIVNPKYEGK
NT seq 2394 nt   +upstreamnt  +downstreamnt
atggatttgaaatgtatcctgtgtacggtactgatttgctgcggctgctggcaaggtctt
gcccaatcagacactagtgagtgtttaaaagccaacgcaaagtcatgtggagaatgtata
caagctggtaaaaattgtggatggtgcaccaaaagtaaattcttacaacagggggagcca
aactctgcacgctgtgatgatatccaatcattgaaaaaaagagggtgtgcaatggatgag
attgaaaatcccaaaggttcacaaacaataaccgctaataaggaacttactggtcgcaga
agcagtggaaagataaagctagaagacattacgcagattcgaccacagaagctaaccctg
aaattgcgatcaggagagccccaaaccttctcattgactttcaagagagctgaggactat
cctattgatctctattatcttatggatctctcattttcaatgaaagatgacttggaaaac
gttaaaaagttaggaaccgaattaaaaaatgaaatgcaaaagataacttcggatttcaga
attgggtttgggtcttttgtcgataaaactgtgatgccgtacatcagcactaccccagcc
aaacgaaaaaatccttgccctaatggtgaaatatgtacgagcccatttagctacaaaaat
gtgctaccattgacgaatgatggatcaaaattcaatgacctcgtaagcaaccaaaccatt
tctgggaatctggactctccggaaggtggttttgatgccatcatgcaggttgctgtctgc
ggggaaaaaattggttggcgaaatgtgactcggttgctcgtattctctacagatgcaggg
tttcactttgcaggagatggtaaactgggaggcattgttctaccaaatgatgggaaatgc
catctcaatactaatggtctctacaccatgagtgattacttagattatccatcaattgct
catttggtacagaagcttagtgaaaataatattcagcctatttttgctgttaccgaagat
ttcaagggtgtatacaaggaactccataatcttattccaaaatctgaagtgggtgttctt
tcttcaaactccagtaatgtcatcaagttgatccttgatgcttatcatgctttatcttct
gaggttatccttgagaacaataaattgccagagggactttcagtgcaatatacagccttt
tgtaagaataatactgttcacacgggtgaaaatggcaggaaatgcttaggtattcagatt
ggtgatgaggtgagcttcaacataagcatcacagcaataaaatgtccaaataaaggtgaa
aagaacactcttgaaataaaacctctgggatttacggagaaagtggaggttacgctcgaa
tatatttgtgaatgtgactgtcataaaaaaggacttcccaatagccaagaatgtcatcag
ggtaatggaacctttgaatgtggagcctgcagatgtaacaaaggacgcattggtagcacc
tgtgaatgcagcactgatgaagtaaacaatgaggacatggatgcttcatgtagaaaagat
aatacatctctaatctgtggtgacaatggagattgcatctgtggggaatgtgtctgcaaa
aagagagtcaataccgatgaaatcatctctggcaaatattgtgaatgtgataacttcaac
tgtgacagagctggtggtttcatctgtggaggaaatggaatctgtaagtgtaagatatgt
gaatgtttccccaactttactggcaatgcctgtgattgctccctggacaattccacttgt
atttcaaagaatggacaggagtgcaatggcagaggaaaatgtgaatgtggtcgatgcaag
tgcactgatccaaaattccaggggtctgcctgcgaaatgtgcccaacttgcccaggagtc
tgtacagcacacagggattgcgttcaatgtaaagcctttcagaaagggcccaagaaagat
acctgcgatcagtgtgagtttaaagttattctggtggataagcaagatgagttaccacaa
ccaggccaagttccatcaattgctcactgtaaggagaaggatgagaatgactgttggttc
tacttttcctattctgtcaatgaccagaatgttccagaagttcatgttaccaaaaatgca
gaatgtccacaggcacctgacatcattccaattgtagctggtgtggttgctggtattgtc
cttataggccttgccttgttgctgatatggaaactactgatgatcattcatgaccgaagg
gagttcgcaaaatttgaaaaggagaaaatgaatgctaaatgggatacaggtgaaaatcca
atctacaagagcgctgtgacgactattgtcaacccaaaatatgagggaaaatga

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