Leucoraja erinaceus (little skate): 129715287
Help
Entry
129715287 CDS
T09122
Name
(RefSeq) integrin beta-1-B-like
KO
K05719
integrin beta 1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri03271
Virion - Rotavirus
leri04145
Phagosome
leri04510
Focal adhesion
leri04512
ECM-receptor interaction
leri04514
Cell adhesion molecules
leri04530
Tight junction
leri04810
Regulation of actin cytoskeleton
leri04820
Cytoskeleton in muscle cells
leri05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
129715287
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129715287
04514 Cell adhesion molecules
129715287
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
129715287
09144 Cellular community - eukaryotes
04510 Focal adhesion
129715287
04530 Tight junction
129715287
09142 Cell motility
04820 Cytoskeleton in muscle cells
129715287
04810 Regulation of actin cytoskeleton
129715287
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129715287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129715287
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
leri04147
]
129715287
04515 Cell adhesion molecules [BR:
leri04515
]
129715287
04090 CD molecules [BR:
leri04090
]
129715287
Membrane trafficking [BR:
leri04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
129715287
Exosome [BR:
leri04147
]
Exosomal proteins
Proteins found in most exosomes
129715287
Cell adhesion molecules [BR:
leri04515
]
Integrins
Integrin beta subunits
129715287
CD molecules [BR:
leri04090
]
Proteins
129715287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
129715287
NCBI-ProteinID:
XP_055521127
LinkDB
All DBs
Position
2:complement(125641340..125709153)
Genome browser
AA seq
797 aa
AA seq
DB search
MDLKCILCTVLICCGCWQGLAQSDTSECLKANAKSCGECIQAGKNCGWCTKSKFLQQGEP
NSARCDDIQSLKKRGCAMDEIENPKGSQTITANKELTGRRSSGKIKLEDITQIRPQKLTL
KLRSGEPQTFSLTFKRAEDYPIDLYYLMDLSFSMKDDLENVKKLGTELKNEMQKITSDFR
IGFGSFVDKTVMPYISTTPAKRKNPCPNGEICTSPFSYKNVLPLTNDGSKFNDLVSNQTI
SGNLDSPEGGFDAIMQVAVCGEKIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLNTNGLYTMSDYLDYPSIAHLVQKLSENNIQPIFAVTEDFKGVYKELHNLIPKSEVGVL
SSNSSNVIKLILDAYHALSSEVILENNKLPEGLSVQYTAFCKNNTVHTGENGRKCLGIQI
GDEVSFNISITAIKCPNKGEKNTLEIKPLGFTEKVEVTLEYICECDCHKKGLPNSQECHQ
GNGTFECGACRCNKGRIGSTCECSTDEVNNEDMDASCRKDNTSLICGDNGDCICGECVCK
KRVNTDEIISGKYCECDNFNCDRAGGFICGGNGICKCKICECFPNFTGNACDCSLDNSTC
ISKNGQECNGRGKCECGRCKCTDPKFQGSACEMCPTCPGVCTAHRDCVQCKAFQKGPKKD
TCDQCEFKVILVDKQDELPQPGQVPSIAHCKEKDENDCWFYFSYSVNDQNVPEVHVTKNA
ECPQAPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENP
IYKSAVTTIVNPKYEGK
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaaatgtatcctgtgtacggtactgatttgctgcggctgctggcaaggtctt
gcccaatcagacactagtgagtgtttaaaagccaacgcaaagtcatgtggagaatgtata
caagctggtaaaaattgtggatggtgcaccaaaagtaaattcttacaacagggggagcca
aactctgcacgctgtgatgatatccaatcattgaaaaaaagagggtgtgcaatggatgag
attgaaaatcccaaaggttcacaaacaataaccgctaataaggaacttactggtcgcaga
agcagtggaaagataaagctagaagacattacgcagattcgaccacagaagctaaccctg
aaattgcgatcaggagagccccaaaccttctcattgactttcaagagagctgaggactat
cctattgatctctattatcttatggatctctcattttcaatgaaagatgacttggaaaac
gttaaaaagttaggaaccgaattaaaaaatgaaatgcaaaagataacttcggatttcaga
attgggtttgggtcttttgtcgataaaactgtgatgccgtacatcagcactaccccagcc
aaacgaaaaaatccttgccctaatggtgaaatatgtacgagcccatttagctacaaaaat
gtgctaccattgacgaatgatggatcaaaattcaatgacctcgtaagcaaccaaaccatt
tctgggaatctggactctccggaaggtggttttgatgccatcatgcaggttgctgtctgc
ggggaaaaaattggttggcgaaatgtgactcggttgctcgtattctctacagatgcaggg
tttcactttgcaggagatggtaaactgggaggcattgttctaccaaatgatgggaaatgc
catctcaatactaatggtctctacaccatgagtgattacttagattatccatcaattgct
catttggtacagaagcttagtgaaaataatattcagcctatttttgctgttaccgaagat
ttcaagggtgtatacaaggaactccataatcttattccaaaatctgaagtgggtgttctt
tcttcaaactccagtaatgtcatcaagttgatccttgatgcttatcatgctttatcttct
gaggttatccttgagaacaataaattgccagagggactttcagtgcaatatacagccttt
tgtaagaataatactgttcacacgggtgaaaatggcaggaaatgcttaggtattcagatt
ggtgatgaggtgagcttcaacataagcatcacagcaataaaatgtccaaataaaggtgaa
aagaacactcttgaaataaaacctctgggatttacggagaaagtggaggttacgctcgaa
tatatttgtgaatgtgactgtcataaaaaaggacttcccaatagccaagaatgtcatcag
ggtaatggaacctttgaatgtggagcctgcagatgtaacaaaggacgcattggtagcacc
tgtgaatgcagcactgatgaagtaaacaatgaggacatggatgcttcatgtagaaaagat
aatacatctctaatctgtggtgacaatggagattgcatctgtggggaatgtgtctgcaaa
aagagagtcaataccgatgaaatcatctctggcaaatattgtgaatgtgataacttcaac
tgtgacagagctggtggtttcatctgtggaggaaatggaatctgtaagtgtaagatatgt
gaatgtttccccaactttactggcaatgcctgtgattgctccctggacaattccacttgt
atttcaaagaatggacaggagtgcaatggcagaggaaaatgtgaatgtggtcgatgcaag
tgcactgatccaaaattccaggggtctgcctgcgaaatgtgcccaacttgcccaggagtc
tgtacagcacacagggattgcgttcaatgtaaagcctttcagaaagggcccaagaaagat
acctgcgatcagtgtgagtttaaagttattctggtggataagcaagatgagttaccacaa
ccaggccaagttccatcaattgctcactgtaaggagaaggatgagaatgactgttggttc
tacttttcctattctgtcaatgaccagaatgttccagaagttcatgttaccaaaaatgca
gaatgtccacaggcacctgacatcattccaattgtagctggtgtggttgctggtattgtc
cttataggccttgccttgttgctgatatggaaactactgatgatcattcatgaccgaagg
gagttcgcaaaatttgaaaaggagaaaatgaatgctaaatgggatacaggtgaaaatcca
atctacaagagcgctgtgacgactattgtcaacccaaaatatgagggaaaatga
DBGET
integrated database retrieval system