Leucoraja erinaceus (little skate): 129715395
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Entry
129715395 CDS
T09122
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04120
Ubiquitin mediated proteolysis
leri04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129715395 (syvn1)
04120 Ubiquitin mediated proteolysis
129715395 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
leri04121
]
129715395 (syvn1)
Enzymes [BR:
leri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129715395 (syvn1)
Ubiquitin system [BR:
leri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129715395 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-RING_16
zf-RING_Vps41
zf-RING_5
zf-HC5HC2H
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
129715395
NCBI-ProteinID:
XP_055521261
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MARSMLATATSLVLTTTVVTHAYYLKRQFYPTVVYLTKSSPSMAVLYIQAFVLVFLVGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVAIFTLLLFLKCFHWLA
EDRVDFMERSPNISVLFHLRVTSLMGLLTVLDLLFVNHACHSIMTRGASVQLVFGFEYAI
LLTMVLTIFIKYVLHTIDLQSENPWDNKAVYMLYTELLTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLTMRQFKKAVTDAIMSRRAIRNMNTLYPDASPEELQLTDNVCIICREEMVT
GAKRLPCNHIFHTRCLRSWFPSSRPAPPPAWTFLRFHAPAPLSSPTLSQPLPQTPLVPQQ
PNLPPGMMPPFPPGLFPFWPPMGHMGQNLFPQAPPAFPPNTRKPNALPPSGQTLRSNAAT
GDSSRSGDSMAGTGLEAPPTGSIPGFPFTFPPFPTAPWVGMPPLPFAMPPMPLPPSGFAG
LTEEELRAMEGQERQNLEARLQCLQNIHTLLDAAMVHIHQYLAVVATLSPPRPTTTERAA
PSTESPEPAAGAQADSPGAPPSPTPAPAADTTSTEPAPAPEEIGPSDLEGAVGYTAPDSP
GSRRGHDEDEEEGARLGEPDAAELRRRRLRNLERPGAPL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcccgatccatgttggcgacggccaccagcctggtgctcaccaccaccgtggtcacc
cacgcctactatctcaagcgccagttctaccccactgtggtctacctcaccaagtccagc
cccagcatggctgtgctgtacatccaggcctttgtcttggtctttctcgtcggcaagttc
atgaggaaggtgttcttcgggcaactgcgggctgcagagatggagcatttaatcgagcgc
tcctggtacgcagtgacggagacctgcctggcgttcaccgtcttcagggacgacttcagc
ccgcgctttgtggccatcttcaccctgctcctcttcctcaagtgcttccactggctggca
gaggatcgcgtggactttatggagaggagcccgaacatctccgtgctgttccacctccgc
gttacctcactcatgggattgctcactgtgttagacctcctgtttgtaaaccatgcttgc
cacagcatcatgacccgaggcgcgtctgtccagctggtgttcggctttgagtacgccata
cttctcaccatggtgctgaccatcttcatcaagtacgttctccacaccattgaccttcag
agcgagaatccctgggacaacaaggccgtttacatgctgtacacggagctcctgaccggc
ttcatcaaggtgctgctctacatggccttcatgaccatcatgatcaaggtgcacacgttc
ccgctgttcgccattcgccccatgtacctgaccatgaggcaattcaagaaggccgtgact
gacgccattatgtcacggcgagcgattcgcaacatgaacacgctgtaccccgacgccagc
ccagaggagctgcaactgacggacaacgtctgtattatctgccgggaggagatggtgacg
ggagccaagcgactgccgtgcaaccacatcttccacaccaggtgcctccgctcctggttt
ccctccagcagacctgccccacctcccgcatggacgttcctgcgcttccacgctcccgcg
cctctctcttcccccactctcagtcagccccttccgcagacgcccttggtgccccagcaa
ccgaacctgcctccgggaatgatgccacccttcccgccggggctgttccccttctggccg
ccgatgggccacatgggccagaacctcttccctcaggccccaccggcctttccccccaac
acccgcaaaccaaacgctcttcccccctccggtcaaacgctcaggtccaacgctgctact
ggtgattcctcgaggagcggagactccatggcagggaccggcttggaagcgccgcccacg
ggctccatcccaggatttcctttcaccttccctccgttcccaacggctccttgggtggga
atgccgccacttccgttcgcgatgcctccgatgccgttgcccccgtcgggatttgccggg
ctgacggaagaggagctgcgtgcgatggaagggcaggaacgtcagaacctggaggcccgg
ctccagtgcctgcagaacatccacacgctgctcgacgctgccatggtccacatccaccag
tatctcgccgtggtggccaccctcagcccccccaggccgacgacaaccgagcgagcggcg
cccagcacggagtcgccggagccggcagcgggagcgcaggcagattcaccgggagcgccc
ccctctcccactcccgctccagcggccgacaccacctcgacagaaccagcaccggctccc
gaggaaataggaccgagcgacctggaaggggcggtgggctacacggcgccagattcgcct
ggcagccgccgcggccacgacgaagacgaggaggagggcgcccggctgggggagccggac
gccgccgagctgcggcgccgccgtctacggaatctggagcgccccggcgccccgctctaa
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