Leucoraja erinaceus (little skate): 129715630
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Entry
129715630 CDS
T09122
Symbol
scrt1a
Name
(RefSeq) transcriptional repressor scratch 1a
KO
K09219
scratch
Organism
leri
Leucoraja erinaceus (little skate)
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
leri03000
]
129715630 (scrt1a)
Transcription factors [BR:
leri03000
]
Eukaryotic type
Zinc finger
Cys2His2 Snail
129715630 (scrt1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-BED
zf-C2H2_15
Zn_ribbon_8
zf-C2H2_16
zf-C2H2_11
DUF7351
Motif
Other DBs
NCBI-GeneID:
129715630
NCBI-ProteinID:
XP_055521471
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Position
2:complement(132305211..132309303)
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AA seq
293 aa
AA seq
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MPRSFLVKKVKLDDFPSPTTSIPSPTSDYDNPYGRGAANNVGSLTTRLHEKGYISEYMTP
SVYDGDRESAIKLSSPEPIYATVPSEYGVPDSEAPDSPQSGISSGYINGDAAVSEGYTVD
AFFITDGRSRRKAVGSSRNTIQRHTCSDCGKTYATSSNLSRHKQTHRSLDSKMAKKCPTC
AKVYVSMPAMAMHLLTHDLKHKCEMCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFAD
RSNLRAHMQTHSAFKHFKCKRCHKTFALKSYLNKHYESACFKGAVPALNAVEA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgttccttcctagtaaagaaagtcaaactggatgatttcccatcccctaccacc
agtatcccgtcaccgacttcagattatgataacccctacggcagaggcgccgcgaataac
gttgggagtctaaccactcggctgcacgagaaagggtacatcagcgagtatatgacacct
tccgtttacgacggagaccgtgagagtgcgatcaagctgtcctcgcccgagcctatctat
gcaacagtgcccagcgagtatggagtaccggactcagaggcgccggacagcccacagtcc
ggtatatccagcggttacatcaacggagacgcggcggtgagcgagggttataccgtggat
gccttcttcatcaccgacggcaggtctaggaggaaagcggtcggcagctcccgcaacacc
atccagcggcacacatgcagcgactgcggcaaaacatacgccacgtcttccaacctgagc
cgccacaagcagacgcaccgcagcctggacagcaagatggccaagaagtgtccgacctgc
gccaaggtttacgtgtccatgccggccatggccatgcacctgctcacccacgacctcaag
cacaagtgtgagatgtgcgggaaggccttcagcaggccgtggctactgcaaggtcacatg
cgctcgcacacgggcgagaagcctttcggctgcgctcactgtggcaaggctttcgccgac
cgctccaacctccgcgcccacatgcagacgcactcggccttcaaacacttcaagtgcaaa
cgttgccacaagaccttcgcgctgaaatcctacctgaacaagcactacgagtccgcctgt
tttaaaggcgccgtgccagcactgaatgcggtggaggcttga
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