KEGG   Leucoraja erinaceus (little skate): 129715777
Entry
129715777         CDS       T09122                                 
Symbol
cldn12
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-12
  KO
K06087  claudin
Organism
leri  Leucoraja erinaceus (little skate)
Pathway
leri03272  Virion - Hepatitis viruses
leri04382  Cornified envelope formation
leri04514  Cell adhesion molecules
leri04530  Tight junction
Brite
KEGG Orthology (KO) [BR:leri00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    129715777 (cldn12)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    129715777 (cldn12)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    129715777 (cldn12)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    129715777 (cldn12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:leri03037]
    129715777 (cldn12)
   04147 Exosome [BR:leri04147]
    129715777 (cldn12)
   04515 Cell adhesion molecules [BR:leri04515]
    129715777 (cldn12)
Cilium and associated proteins [BR:leri03037]
 Other cilia and associated proteins
  Stereociliary proteins
   129715777 (cldn12)
Exosome [BR:leri04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   129715777 (cldn12)
  Exosomal proteins of colorectal cancer cells
   129715777 (cldn12)
Cell adhesion molecules [BR:leri04515]
 Immunoglobulin superfamily
  L1 family
   129715777 (cldn12)
SSDB
Motif
Pfam: PMP22_Claudin Clc-like
Other DBs
NCBI-GeneID: 129715777
NCBI-ProteinID: XP_055521604
LinkDB
Position
Unknown
AA seq 322 aa
MSCPRVQLTPVLSLLGGLVSLSTLLASTLNPSWRSQRLASGGRTQANLTVTDGLWERCVR
AESGSGSGSDRCIYRDVQWYRTVDQLDIRLLQLGLPLSLGVGTIALFLTALGVCQTACTS
STPGSGITHCSVNSAGCFLISGVLYLLSCALCLSPTLYLLFHTRRLNQRFGPDWTSGIGV
LLALGSAAGLLGCAGLQTLWYCLCRGSGGDGQLWQPLLGPQGTPXHLPGSPPLLLQYLPT
IQALHPGDRHSHHQASGLLVGERGGEEREEGGDDPDCPPWIDIPVIRLASGGERGGAGVN
FKVIGFLKPGNAERGGTEEEVR
NT seq 969 nt   +upstreamnt  +downstreamnt
atgtcttgcccccgtgtccagctgacccccgtcctctcgttgctggggggcctggtcagc
ctgtccacgctgctggcgtccaccctcaacccgagctggcgttcgcagcgcctggcgtcc
ggcggccgcacccaggccaacctgaccgtgacggacgggctgtgggagcgctgcgtgcgc
gcggagtcgggctcgggctcgggctcggaccgctgcatctaccgcgacgtccagtggtac
cggaccgtcgaccaactggacatccgcctcctccagctggggctgccgctgtcgctcggt
gtggggacgatcgctctcttcttgaccgcgttgggagtctgtcagaccgcctgcacgtcc
agtactccgggctccggtatcacccactgctccgttaactccgctggctgcttcctcatc
tccggagtcctctacctcctctcctgcgccctctgcctttcccccaccctctacctcctc
ttccacactcgacggctcaaccagagattcggccccgactggactagtggtatcggggtg
ctgctggccctggggtcagcggccggtctgctgggctgcgctgggctccagacgctgtgg
tactgcctgtgccgggggtcagggggggacgggcagctgtggcagccactgctggggccg
caagggacccccnnccatctacctgggtccccccctctcctgctccaatacctcccgacg
atccaggctctccaccctggagatcgacattcccatcatcaggcatcaggcttgctagtg
ggggagagagggggggaggagagagaggaggggggagatgatccagactgtccaccctgg
atcgacattcccgtcatcaggcttgctagtgggggagagaggggaggcgctggagtcaat
tttaaggtgatcggctttctaaagccgggaaacgccgaaagaggggggacggaagaggaa
gtaaggtga

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