Leucoraja erinaceus (little skate): 129715979
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Entry
129715979 CDS
T09122
Name
(RefSeq) autophagy-related protein 16-1-like
KO
K17890
autophagy-related protein 16-1
Organism
leri
Leucoraja erinaceus (little skate)
Pathway
leri04136
Autophagy - other
leri04140
Autophagy - animal
leri04145
Phagocytosis
leri04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
leri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
129715979
04140 Autophagy - animal
129715979
04136 Autophagy - other
129715979
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129715979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
leri04131
]
129715979
03029 Mitochondrial biogenesis [BR:
leri03029
]
129715979
Membrane trafficking [BR:
leri04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
129715979
Others
Specific organelles associated proteins
Auto phagosome
129715979
Mitochondrial biogenesis [BR:
leri03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129715979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
ATG16
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_Aladin
CFAP251_N
Beta-prop_ACSF4
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF4
RMC1_N
FPP
AAA_RNF213_4
DUF7675
CENPH
Motif
Other DBs
NCBI-GeneID:
129715979
NCBI-ProteinID:
XP_055521840
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MRSDHEGEAGTAHSLSPASLPTAHSLSLSTHPRRHQNLLPSAFIEVHGVNSPSLLPSSLS
RPAAAARWRAHICRQLRRRDREQKQRFKTIINAYNQLLEKSNFLHHWREKCDPYLHPVSS
LPSDPETTEMIQLRYQEQLSKMQLTNGELAQAVFELNKKQRGKEAELQDSHTRLEGTWRR
LDTAEEEERRLRVQVARLEEANLAVKEEYDRLQLLHHTLEQHLRSQQQETVELIQNLMQI
KTEAAQRENLQIEKPRSTDLRNLQEDLAIVSSLPFLDKTEFLASPPEDASRDDGRRPKGS
RSASFSLPGQHKFLQSVKGIFRMRSSASCSSIDCSPSGFFAFTRVPVQVRHSVTAHDGEV
NAVRFSPNSKVVATGGSDRKVKLWEIVGGTLENQKTLEGSNDGVTSIEFDTSGLHLLAGS
YDNSARLWSLKDCELKHTLSGHGAKVTAAKFKFHLQEAVTGSHDRTLKIWDLNKPACVKS
LQAPSRCSDLVCSDYLVISGHFDKKIRLWDTRLGMQTDVMTLLDRVTSLDISLDRTQLLS
CSRDDTLTVTDLRMNRQWRQLRAEGFKCGADWTKAIFSPDGNYAAAGSYDGSLHLWEVLT
GSLVTSLYGQHRSSINAVSWSLSGEYVVSVDRTKTANLWTDY
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctgatcacgaaggtgaagctggcactgcccacagcctctcgccagcctctctg
cccactgcccacagcctctctctgtccacccaccccagacgccaccagaatcttttacca
tctgcattcatcgaggttcacggggtaaattcgccctccctcctgcccagctccctctcc
cgccccgccgccgccgcccgctggcgggcacacatctgccggcaactccgccgccgagac
cgcgaacagaagcaacgcttcaagaccatcatcaacgcctacaaccagctcctggagaaa
tcaaacttcctccaccactggcgggaaaaatgtgatccctatctgcatcctgtgtccagt
ctgccatcggacccggagacaacggaaatgatccaactccgataccaggagcaactctcc
aagatgcagttgaccaacggggagctcgcccaggcggtgtttgagttgaacaagaagcag
aggggcaaggaggcggaactacaggactcccacaccaggctggaggggacgtggcggcgt
ctagacacggctgaggaggaagagcggaggctgagagtgcaggtggcgaggctggaggag
gccaacctcgcagtgaaggaggagtacgacaggctgcagctgctgcaccatacgctggag
cagcacctgcgcagccagcagcaagagacggtcgagctgatccaaaacctgatgcagatc
aaaactgaggcggcgcagcgggagaacctgcagatcgagaaaccccgcagtactgaccta
agaaacctgcaggaggatttggcgatcgtttcaagtttgccgttcttggacaagacggag
tttctggccagcccaccagaggatgccagtcgggatgatggcaggaggcccaagggaagc
agatcagcctccttcagtcttccaggccagcacaagttcctgcagtctgttaaaggaatc
ttcaggatgcggtccagtgcttcttgcagttcgattgactgcagcccatcgggattcttc
gccttcaccagagtcccagttcaagttcggcacagcgtgacagcccacgacggggaggtg
aacgctgtcaggttctccccaaactccaaggtcgttgccacgggcggcagtgacaggaag
gtgaagctgtgggagattgttggaggaacccttgagaaccagaagaccctggaaggcagc
aatgatggggtgaccagcattgaatttgacacctcggggctgcacctcttggctggatcc
tacgataactcagcacgtctgtggagtctcaaggactgcgagctgaagcacactctgtca
ggccacggggccaaggtcacggctgcaaagttcaagttccatttacaagaggcggtgaca
gggagtcacgatcgaacgctgaagatctgggacctcaacaaacccgcttgtgtgaaatcc
ttgcaagcaccctctcgctgcagtgatctcgtttgttcagactacttggtcattagcggg
cactttgacaagaagatccgactctgggacaccaggttggggatgcagacggacgttatg
acgctgctggacagagtgacctctctggacattagcctggaccgcacgcagctgctcagc
tgctcccgcgatgacacgctgaccgtcaccgacctgcgcatgaatcggcaatggcgccaa
ctccgggcagaaggcttcaagtgtggtgccgactggactaaagccatcttcagtcccgac
gggaactacgccgcggctggctcttatgacggatcgttgcatctttgggaagtcctcacg
ggatctctggtgacctcgctatacggccaacacagatcctccatcaacgccgtctcctgg
tctctgtcgggcgagtacgtggtcagcgtggacaggacaaagaccgccaacctttggacc
gactactga
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integrated database retrieval system
