Candidatus Legionella polyplacis: CCU22_02355
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Entry
CCU22_02355 CDS
T05191
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
les
Candidatus Legionella polyplacis
Pathway
les03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
les00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCU22_02355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
les03019
]
CCU22_02355
03009 Ribosome biogenesis [BR:
les03009
]
CCU22_02355
Enzymes [BR:
les01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CCU22_02355
Messenger RNA biogenesis [BR:
les03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CCU22_02355
Ribosome biogenesis [BR:
les03009
]
Prokaryotic type
rRNA processing factors
CCU22_02355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ATW02023
LinkDB
All DBs
Position
complement(476512..478269)
Genome browser
AA seq
585 aa
AA seq
DB search
MEKILINAIQNEEIRVALIKNNYLYDLDIECPSETKKKGNIYKAIITRIEPSLNAVFVTY
GSKKQGFLPLKEILPKYLKQKQNNNSSNFKEEFKKYPIHSLLEEKQELLVQVNKEERGNK
GAALTTYITLAGCYLVLMPDNPKSNGISRRIEGEDRENLKEIIETLKIPKNMSIIIRTAG
FGKKINELQSDLNILYNQWKIILKEFNTKTAPCLIHQEGDIIIRSIRDNLYKTINDIIID
NQFSYIKAKKYIEKIKPELLPNLKLYNSSIPLFTFFHIESQIETAYQRKVLLPSGGSLII
DRTEALVSIDINSSKSTSGTDIEDTALNTNLEAAHEIARQLRLRDLSGLIVIDFIDMYQI
KNQREVENCLRESLKTDRARIQIGHISRFGLLEMSRQRLRLSLGESSQEVCPKCEGRGTV
RNIQSYSLSILRLAEEEALKEKTFAVKIQLPAEIATFIFNEKREFIQNIEKRHEVKIIII
SSPYLEIPQYIITKIFYYEKNKKLNYSPTKKIDSSNIYSDYKYNNFINHPTITSKIPITS
QQQKNIKKYKKHKNLLKRFWYNLFNGAKKKNNNIKQNNINITTRL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatactaataaatgcaatccaaaacgaagaaattagagttgcactaattaaa
aataattatttatacgatttagacattgaatgtccatcagaaactaaaaaaaaaggtaat
atatataaagcaataattacacgtatagaacctagtttaaatgcagtttttgtaacatat
ggatctaaaaaacaaggattcttaccattaaaagaaatattacctaaatatttaaaacaa
aaacagaataataattcttcaaactttaaagaagaatttaaaaaatatccaattcattct
ttattagaagaaaaacaagaattactagttcaagtaaataaagaagaaagaggcaataaa
ggagctgcactaactacatacataacattagcaggatgctacttagtactaatgccagac
aatcctaaatcaaatggaatttctagaagaattgaaggagaagatagagaaaatcttaaa
gaaatcatagaaactttaaaaatccctaaaaatatgagtatcataattagaacagctgga
tttggaaaaaaaataaatgaattacaatctgatttaaacatattgtacaaccaatggaaa
attattttaaaagaatttaatacaaaaacagctccatgtttaatacaccaagaaggagat
ataattattagatcaataagagataacttatataaaactataaatgatataatcattgat
aatcaattttcttatatcaaagcaaaaaaatatatagaaaaaataaaaccagaactttta
ccaaatctaaaattatataacagtagtataccactatttactttctttcatatcgaaagt
caaatcgaaacagcctatcaacgaaaagttctattaccatctggaggttctttaataatt
gatagaacagaagctcttgtatctattgatataaactcatctaaatcaactagtggaaca
gatatagaagatacagctttaaatactaacctagaagcagctcatgaaattgcaagacaa
ttaagattaagagaccttagtggattaattgttatcgactttatcgatatgtatcaaatt
aaaaaccaacgagaagtagaaaactgtttgcgcgaatctttaaaaactgatagagcaaga
attcaaataggtcatatatcacgattcggattattagaaatgtctcgtcaacgattaaga
ttatctttaggagaatcttctcaagaagtatgtccaaaatgtgaaggaagaggaactgta
agaaatatacaatcatatagtctatctatattaagattagcggaagaagaagcattaaaa
gaaaaaacatttgcagtaaaaattcaattaccagctgaaatagccacttttattttcaat
gaaaaacgtgaatttattcaaaatattgaaaaacgtcatgaagtaaaaattataattatc
tctagtccttatttggaaatacctcaatatataattacaaaaatcttctattatgaaaaa
aataaaaaattaaattattccccaacaaaaaaaatagactcatcaaacatatattcggat
tataaatataataattttataaatcatccaacaattacgtcaaaaatacccataacatca
caacaacaaaaaaatattaaaaaatataaaaaacataaaaatttattaaaacgattttgg
tataatttatttaatggtgcaaagaaaaaaaataacaatattaaacaaaataatattaat
attactacaagattataa
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