Leptolyngbya sp. O-77: O77CONTIG1_00852
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Entry
O77CONTIG1_00852 CDS
T04251
Symbol
recQ_2
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
let
Leptolyngbya sp. O-77
Pathway
let03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
let00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O77CONTIG1_00852 (recQ_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
let03019
]
O77CONTIG1_00852 (recQ_2)
03400 DNA repair and recombination proteins [BR:
let03400
]
O77CONTIG1_00852 (recQ_2)
Enzymes [BR:
let01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O77CONTIG1_00852 (recQ_2)
Messenger RNA biogenesis [BR:
let03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O77CONTIG1_00852 (recQ_2)
DNA repair and recombination proteins [BR:
let03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O77CONTIG1_00852 (recQ_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
HEM4
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAU41045
LinkDB
All DBs
Position
951344..952804
Genome browser
AA seq
486 aa
AA seq
DB search
MHLTDSVSAPEWARVRATFQLVWGYDDFRPPQGDIVRSLLSGCDALVVMPTGGGKSLCFQ
LPALLQTGLTLVVSPLVALMENQVQELREKRLPAALLHSELPPRQRQQTLWQLEQGKLRL
LYLSPETLLSMPVWNLLSQPQVQIRGLILDEAHCLVQWGDSFRPAYRRLGAVRPALLAAK
PAGTTLAIAAFTATADPQAQRTISEVLGLNQPQVFLQNPYRANLALSVQTVWSPRGRRRS
LLQFIQARRGKAGLVYVRSRREGEDLADWLNQAGFRTAAYHAGLGPAQRRQIEQAWLGGQ
MPFVVCTSAFGMGINHPHVRWVVHYHAPLLLSEYVQEVGRAGRDGKPAEALTLVSDRPGW
LNPDDRQRQQFFTEKARSQHQTAQSLIRKLPKAGPVAGVARQFPDGAIALALLHRNGQLV
WDDPFHYRILPGATPQPFRADPAIRQMQDYLYTRECRWRLLLRSFGFAKEAEALRCQTCD
RCGFCL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaccgattccgtttctgcgccagagtgggcgcgtgtccgggcgacgtttcag
ctggtttggggctacgacgactttcgaccgccgcagggcgacatcgtgcgatcgctcctc
tctgggtgcgatgccctggtggtcatgcccacggggggcggcaagtcgctttgcttccag
cttccggcgctgctgcaaacggggctgacgctggtggtgtcgccgctggtggcgctgatg
gaaaaccaggtgcaggagttgcgcgaaaagcggctgcccgctgccctgctgcatagcgag
ctgccgccccgccagcgccagcaaacgctgtggcagttggagcagggcaaattgcggctg
ctgtatctgtcgccagagacgctgctgagtatgccagtgtggaacctcctgagccagccg
caggtgcagattcgcgggctaattttggatgaggcacattgcctggtgcagtggggcgac
tcgtttcggccggcttatcggcggctgggggcggtgcgaccggcgctgctggcagcgaaa
cccgcaggcacaacactggcgatcgccgcgttcaccgccacggccgacccgcaggcgcag
cggacgatttccgaagtgctggggctgaaccagccgcaggtgtttttgcaaaatccttac
cgagcaaacctggcgctgtccgtgcaaacggtgtggagtccacgcgggcgcaggcgatcg
ctcctccagttcatccaggcgcggcggggcaaggcggggctggtctacgtgcgatcgcgc
cgcgaaggggaagacctggcagactggctgaatcaggcaggctttcgcacggcggcgtat
catgcggggctgggcccggcgcagcggcggcagatcgagcaggcgtggctgggcgggcag
atgccgtttgtggtttgcacgagcgcctttggcatgggcattaatcatccccacgtccgc
tgggtggtccactatcacgcgccgctgctgctgagcgaatatgtgcaggaggtggggcgg
gctgggcgcgacggcaaacccgccgaagcgttgactctggtgagcgatcgccccggttgg
ctaaacccagacgatcgccagcggcagcagttttttaccgaaaaagcgcgatcgcagcac
caaactgcccaatcgctgatccgcaagctgcccaaagcagggcccgtggccggggtggcc
cgccagtttcccgatggggcaatcgccctggccctgctccaccgcaacggtcagctggtc
tgggacgatccgtttcactaccgcatcctgcctggcgcgacaccgcagcccttccgggca
gaccccgccatccgccaaatgcaggactacctctatactcgcgagtgtcgctggcggctg
ttgctgcggagctttggctttgcgaaagaggcagaggcgctgcgctgccaaacgtgcgat
cgctgtgggttctgtttgtag
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