Leptolyngbya sp. O-77: O77CONTIG1_00958
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Entry
O77CONTIG1_00958 CDS
T04251
Symbol
ydcV_1
Name
(GenBank) Inner membrane ABC transporter permease protein YdcV
KO
K02053
putative spermidine/putrescine transport system permease protein
Organism
let
Leptolyngbya sp. O-77
Pathway
let02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
let00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O77CONTIG1_00958 (ydcV_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
let02000
]
O77CONTIG1_00958 (ydcV_1)
Transporters [BR:
let02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
O77CONTIG1_00958 (ydcV_1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
DUF2678
CoV_NSP4_N
Motif
Other DBs
NCBI-ProteinID:
BAU41151
LinkDB
All DBs
Position
complement(1062748..1063560)
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AA seq
270 aa
AA seq
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MQQKRSLTYYLLAGFFGLFVLFLYGPMLAIFILSLQGEEGTLTFPMKGFSFYWLGQVFQE
QRVGNFTDAFWRSLLLGLIVTLLSVIVTVMSALAFRQRFKGAGTLFYLTIASLIVPSVLI
SLGIGIVFQVLDLETNWFSSGLGAHLTWTVPFAFLIMLGIFNRFNPSYEEASRDLGANDT
KTFWEIVFPLILPALIGIGLLGFTLSYDEFTRTSLVSGQKNTLPLEIFGMTTNVTSPALY
ALGTLTTLFSFAMILLAIAAYNYTSRRQSQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaaacgctccctgacttactacctgctggcgggcttctttgggctatttgtc
ctgtttctctacggccccatgctggcgatctttatcctgtcgctgcaaggcgaagagggc
acgctgacgtttccgatgaaaggctttagcttctactggttggggcaggtcttccaggaa
cagcgcgtgggcaactttacagatgccttctggcgatcgctcctcttgggactgatcgtg
acgctgctatcggttatcgtcacggtcatgtctgccttggccttccggcagcggttcaaa
ggggctggaaccctgttctatctgacgattgccagcctgatcgtgcccagcgtgctgatt
tctctaggcattggcattgtatttcaggtgctggatttggaaacgaactggttctcgtcg
ggtctaggcgcacacctaacctggacggttccctttgcctttctaatcatgctgggcatt
ttcaaccgatttaacccgtcctacgaagaggcttcccgcgacctgggcgcaaacgacacc
aaaaccttctgggagattgtgtttccgttgattctgccggcgctgatcggcattgggcta
ttgggctttacgctgtcctacgacgaatttacgcgcacgtcgctggtgtcagggcaaaag
aacacgctgccgctggaaatcttcggcatgaccaccaacgttacctcgcctgcgctgtat
gctctgggcaccctgacgacgctgttttcctttgccatgattctgctggcgatcgccgcc
tacaactatacctcgcgccgccagtcgcagtga
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