Leptolyngbya sp. O-77: O77CONTIG1_01912
Help
Entry
O77CONTIG1_01912 CDS
T04251
Name
(GenBank) Type III restriction enzyme, res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
let
Leptolyngbya sp. O-77
Pathway
let03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
let00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
O77CONTIG1_01912
09124 Replication and repair
03420 Nucleotide excision repair
O77CONTIG1_01912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
let03021
]
O77CONTIG1_01912
03400 DNA repair and recombination proteins [BR:
let03400
]
O77CONTIG1_01912
Enzymes [BR:
let01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O77CONTIG1_01912
Transcription machinery [BR:
let03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
O77CONTIG1_01912
DNA repair and recombination proteins [BR:
let03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
O77CONTIG1_01912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAU42094
LinkDB
All DBs
Position
complement(2127143..2128816)
Genome browser
AA seq
557 aa
AA seq
DB search
MVYVADNALIIQSDRSVLLEVHSPRAEAAREAIAPFAELVKSPEHIHTYQISPLSIWNAR
AAGMPVADMIAALREHAKYPMPDAVAQEIEALGSRYGLTVIEREGDCLLLKMADQPLAEL
LSRNESVAKFLGDRRSALVFEVNAGDRGVLKQALLGAGYPAEDLAGYVEGDALSIELRSV
SQSGQPFSLRDYQKEAAEVFYQAGSVRGGSGVIVLPCGAGKTMVGMAAIAAVQENTLVLT
SSLTSVRQWRRELLDKTTLPPEAIAEYSGETKQTGPITLATYQILSYHDHKTGDFPHFQL
FSARSWGLIIYDEVHLLPAPIFRITAELQARRRLGLTATLIREDGKEGDVFALIGPKRYD
VPWRELEGRGFIAAAECTEIRVPQDSDRQMEYALAEKRQQFRIAAENPRKAEVVMSLLQQ
QAGHRILIIGEYLDQLKHLAELTNLPIVTGKTSQRDRDQLYEQFRAGTVAGLILSRVGNF
ALDLPDADVLIQVSGKYGSRQEEAQRLGRVLRPKADGRSAQFFTLVSFRTCEEDFARHRQ
LFLAEQGYSYHIQVLDS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtctacgttgccgacaacgccctcattattcagagcgatcgctcggtcttgctggag
gttcactcgcctagggcagaggcggcgcgggaggcgatcgccccctttgctgaactggtc
aaaagcccggagcatatccacacttaccagatttcgcccctcagcatttggaatgcgcgg
gcagcgggaatgcccgtcgcagacatgatcgccgccctacgggaacacgccaaatatcct
atgcccgatgcagtggcgcaggaaatcgaagccctgggcagccgctatgggctgacagtg
atcgagcgggagggcgattgcctgctgctgaagatggcagaccaacccctggcagaactg
ctcagccgcaacgagtctgtggctaagtttctgggcgatcgccgctcggcgctggtgttt
gaggtgaacgcgggcgatcgcggcgtgttgaaacaggccctactaggggcgggctatccg
gcggaagatttggcgggctatgtagaaggtgatgcgctgtctattgagctgcgctcggtc
agccagtctgggcagccgttttccctgcgagactatcaaaaagaggccgccgaggtgttc
taccaggcgggcagtgtgcgcggtggcagtggggtcattgtgctgccctgcggcgcgggc
aagacgatggtgggcatggcggcgatcgccgctgtccaggaaaatacgctagtgctaact
agcagcctcacctcggtgcgccaatggcggcgggaattgctcgacaaaaccacgctgccg
ccagaggcgatcgccgaatacagcggcgaaaccaagcaaacgggcccgattaccttggct
acttaccagatcctcagctaccacgaccataaaacgggcgacttcccccattttcaactg
tttagcgcccgctcctgggggctgatcatctatgacgaagtgcatctgctgcctgcgccg
atttttcgcatcacggctgagctacaggcccgccgccgcttgggtctgactgcgacgctg
atccgtgaagatggcaaggagggcgatgtgtttgcgctcattgggcccaagcgctatgac
gtgccctggcgggaactggaaggacggggcttcatcgcggcggcagaatgtaccgaaatc
cgcgtgccccaagactcagaccgccagatggaatacgccctggcagaaaaacgccaacag
tttcgcatcgccgccgaaaatccgcgcaaggccgaggtggtgatgtcgctgttgcagcag
caagccggacaccggattttaatcatcggcgaatatctggatcagcttaagcacctggca
gagctaacgaatttaccgattgtgaccgggaaaacctcgcagcgcgatcgcgaccaactt
tacgaacagttccgcgctggcacagttgccgggctgatcttgtcgcgggtgggcaacttt
gcgctggatttgcccgatgcggacgtgctgatccaggtgtcgggcaagtatggttcccgc
caggaagaggcacagcggctagggcgagtgctgcggcccaaggcagacggtcgcagcgcc
cagttctttacgctcgtttcgttccgcacctgcgaagaagactttgcccgccatcgccag
ctttttttggcagagcagggctatagctatcacattcaggtgttggactcgtag
DBGET
integrated database retrieval system
