Leptolyngbya sp. O-77: O77CONTIG1_04084
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Entry
O77CONTIG1_04084 CDS
T04251
Name
(GenBank) putative DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
let
Leptolyngbya sp. O-77
Brite
KEGG Orthology (KO) [BR:
let00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
let03400
]
O77CONTIG1_04084
DNA repair and recombination proteins [BR:
let03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O77CONTIG1_04084
Archaeal homologous recombinant proteins
O77CONTIG1_04084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_15
AAA_29
Rad50_zn_hook
AAA_21
RsgA_GTPase
RNA_helicase
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
BAU44245
LinkDB
All DBs
Position
complement(4573479..4576757)
Genome browser
AA seq
1092 aa
AA seq
DB search
MIPLQLKLKNFLSYRQAALDFRGLHVACVCGQNGAGKSSLLEAIAWAIWGESRVTHEDDV
IHQGETEAQVEFTFGCRQQTYRVLRTRVRGQTSSLELQIETPTGFRPLTERGVRATQQLI
LQHLRLDYETFVNSAYLRQGRADEFMLKRPGERKQILADLLKLDQYDEAAETARERSRLA
KAELDVLERSLETLAQQLEAGASLSAECEALRAQIDTWQRDQTSDTDALHQLQAVQQQRR
AWTQQLQSHQQQEQRLRQDGQRLQQDLAAAQQQLRSLEAILSKADEITAGYTEFHSLQTE
EEIQSAKFHAHQAAIAQRDQLQQQLSTQLAALQDQHSRLQAQRDTLQQQIQELQHTLAKA
PDLDTALENLRTARERLVQLDQLQSQAAPLMQRQQQIRATLDRAQARLQARLEEYQTTRQ
QLLQQQGQQAQACQALTAIMERSAYLENRRRYQQELREKGMERRTFMERLQERQRELEAQ
VAGLDNKMALLQQQMPGAIAQPASSLEPHRTSLERASERASEQSSTQSPELSSDFLEAER
ADSAGIRKRRGKTKQTTLKVLPDAALMVHSQEQPGSQSSFPPCPLCDRPLDEHHWAVVME
RHHAEKQELYDQLWVIREQLAVSEREIQVLRQEYRDLEKELADYSDVLQLQGQLQQQVQD
RATVEARLQQLAQEEADLGRSLQTGDYAPDLHEELRLLDETLAQLQYDDRDHALARGEVD
RWRWAEIKHAELKQAQKRLQQLLAQQPELEAQLATVEQQRAELLNQSVLQRQIRDLEQQI
EAIAYNLKRHTTLRNALRLAQVWQLRYQELQQAQQQYPQVQQQVKDLAARLTERSHLLDH
LAADVRMLVQQIEATPDPAGAIATLEQQIQQRRTQLDAGLANLGRLEQQIQQLAALEQQQ
ADLLIQQRNLQRQRQVYHELAQAFGKNGIQALMIENVLPQLEAEANQILGRLSNHQLHIR
FVTQRARRKGKSTSPQGLIDTLDILIADANGTRPYETYSGGEAFRVNFSIRLALARLLSQ
RSGTAMQMLIVDEGFGTQDDAGCDRLIAAIQAIAPDFACILTVTHMPRFKEAFQTHIEVT
KTEQGSTLSLVF
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgattccgctgcaattaaaactcaaaaatttcctcagctatcggcaggcggcgctcgac
tttcgggggctgcatgtggcgtgtgtgtgcgggcaaaacggcgcgggcaaatcttcgcta
ctagaggcgatcgcctgggcaatctggggtgaaagccgcgtaactcacgaagacgacgtg
attcaccagggcgaaaccgaagcccaggtagagtttacgtttggctgtcgccagcagacc
tatcgagtgctgcggacgcgagtccgcgggcagaccagcagcctggagcttcagatcgaa
acgccgacggggtttcgtccgctgacggaacggggagtgcgggcgacgcagcagttgatt
ttgcaacacctgcggctagattatgaaacctttgtcaactcagcctatctgcggcagggg
cgggcagacgaattcatgctgaagcggccgggcgagcgcaagcagattctcgctgacttg
ctaaagctggatcagtatgacgaggcggcggaaaccgcccgagagcgatcgcgcctggcc
aaagcagagctagacgtgctggagcgatcgctagaaacccttgcacaacagctagaagca
ggcgcgtctttatcggcggagtgcgaagcgctgagggcgcaaatcgacacctggcagcgg
gatcagaccagcgataccgatgcactgcaccaactgcaagccgtgcagcagcagcgccgc
gcctggactcagcagttgcaatcgcaccagcagcaagagcagcggttgcggcaagacggc
cagcgactccagcaggatttggcagcagcccagcagcagttgcgatcgctcgaagcgatc
ctctcaaaggcagacgaaatcaccgcaggctacaccgagtttcacagcctgcaaactgag
gaagagattcagtctgccaagtttcatgctcaccaagcggcgatcgcccagcgcgaccaa
ctccagcagcagcttagcacccagcttgctgcattgcaggatcagcactcgcgcctccag
gcacagcgcgacaccctccagcagcaaatccaggagttgcagcacactctggcaaaagcg
cctgacctcgacactgctctagaaaacttgcgaacggcgcgagagcggctggtgcagcta
gaccagcttcagtcccaggctgcccccctgatgcagcgccagcagcagattcgtgcgacg
ctggatcgcgcccaggcacggctccaggcccgtttagaagaatatcaaacgacccgtcaa
cagcttcttcagcagcagggtcagcaggctcaggcttgtcaagcgctaaccgcgatcatg
gaacggagcgcgtatttggaaaatcgccgtcgctatcagcaagaattgcgcgagaaaggt
atggagcggcgtacctttatggaacggctccaggaacgtcagcgcgaactagaggcgcag
gtggcggggctggacaataaaatggcgttgcttcagcagcagatgcctggtgcgatcgcc
cagcctgcctcttctctagagccgcatcggacttctttggaacgggcctctgaacgagcg
tctgaacaatcttcgacacaatctccagaactctcttctgattttctagaggcagagcgt
gctgattcggcgggaatccgaaaacgtcgcggaaagacaaagcaaacgacgctcaaggtg
ctaccggatgcagcgttaatggttcatagccaggagcagccaggttcccagagcagtttt
cccccgtgtcccctgtgcgatcgcccgctggatgagcatcattgggcggtggtgatggag
cggcatcacgccgaaaagcaggagctttatgatcagctttgggtgattcgagaacagctt
gccgtttcggagcgcgaaattcaggtgttgcgccaggaatatcgcgatctagaaaaggaa
ctggcagactatagcgatgttttgcaactgcaaggccagcttcagcagcaggtgcaggac
agggcgaccgtcgaggcgcggctgcaacagttggcgcaggaggaggcagatctggggcga
tcgctccaaacaggcgactatgctcccgacctgcacgaagagttgcgcctgctggatgaa
accctggcgcagcttcaatatgatgatcgcgaccatgccttggcgcggggcgaggtcgat
cgctggcgctgggcagagatcaaacacgcggagctaaagcaggcgcaaaagcggctccag
cagctactcgctcagcagccagagttggaggcgcaactggcaaccgtagaacagcagcgg
gcggaattgctgaaccagtcggtgttgcagcggcagattcgcgacttggagcagcaaatc
gaggcgatcgcctataacctgaagcgccacaccacgctgcgaaatgcgctgcggctggcg
caggtgtggcagttgcgttatcaggagcttcagcaggcgcagcagcaatatccccaggtg
cagcagcaggtgaaggatttggcagcgcggctgacagagcgatcgcacttgttagaccat
ctcgccgcagacgtccgaatgctggtgcagcaaatcgaagccacgcctgaccccgcaggg
gcgatcgccaccctagaacagcagatacagcagcggcgcacccagttggatgcggggctg
gccaatttgggacggctggagcagcagattcagcaacttgcagccctagagcagcagcag
gcagatttgctgattcagcagcgcaacctccagcgccagcgccaggtctatcacgagcta
gcgcaagcctttggaaaaaacggcatccaggcattaatgatcgaaaatgtgctgccgcag
ctagaggcagaggcaaaccagattctaggacggctgagcaatcatcaactgcatattcgg
tttgtgacgcagcgggcccgccggaaggggaaatccaccagtccccaaggcctgatcgac
acgctggatatcctgattgccgatgccaacggcacgcgcccctacgaaacctattccggc
ggcgaagccttccgggtgaatttctcgatccggctggcgctggcgcggctattgtcgcag
cggtcgggcacggcgatgcaaatgctgatcgtggatgaaggctttggcacgcaggacgac
gcgggctgcgatcgcctgattgccgcgattcaggcgatcgcccccgattttgcctgcatc
ctcaccgttacccacatgccccgcttcaaggaagccttccagacccatattgaggtgacc
aagaccgaacagggttcaaccctcagtctggtgttttag
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integrated database retrieval system
