Leptolyngbya sp. O-77: O77CONTIG1_04260
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Entry
O77CONTIG1_04260 CDS
T04251
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
let
Leptolyngbya sp. O-77
Pathway
let02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
let00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
O77CONTIG1_04260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
let02000
]
O77CONTIG1_04260
Transporters [BR:
let02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
O77CONTIG1_04260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_21
RsgA_GTPase
7tm_7
ABC_membrane_3
AAA_16
Zeta_toxin
AAA_29
AAA_23
MMR_HSR1
ABC_ATPase
AAA_15
TsaE
AAA_7
DEAD
T2SSE
NB-ARC
AAA_19
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAU44421
LinkDB
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Position
complement(4785307..4787079)
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AA seq
590 aa
AA seq
DB search
MIRGPSPIVAAEQKPKLSTLRRFLQYFAPYRQEIPIALLLVMIGAATQSVGPLLIGWAID
NLILQGDWPGLARLLALLVVIYVLGVVAIRGQIWRIGNMMQRVLGQLRQDLFTKVQSLPV
SFFDRSEAGDLMSRLLNDVNTVNQAFGLTVPQMLGQSFSLIGIIIAMLSMNLQLGLLSNL
VVPMMIFTTGFFSRWARRRFRVARETIGELSAKLEEDISSVREAQAFNRTQLNIEEFDSL
NEANRRANIQAVAVTSAFLPSIDFLNTLATAGVMAYGGYLAVTGAMSVGVVTAFLLYVQQ
FFRPIQILSQFYTQAQSGLAGLDRIFLLLDEPATLQDAPNATEMPPIRGEVRFESVSFGY
TENQRVLQEVSLVAEPGQMVALVGPTGAGKSTIINLILRFYDVTEGAVKIDGIDVRRVTQ
ASLRRQIGIVLQDNLLFSGTVAENIAFGAPDASQTEIEAAAQTANVHEFITSLPQGYSTL
LGERGAPLSQGQRQLVSIARAVLINPKILILDEATSSIDTRTEALVQEAIARLLQNRTSF
VIAHRLSTVAQADQVLVVQQGQIAERGTHTELIAQKGIYANLYALQLGAS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaggcccgtcccccattgtcgctgcggagcaaaagcccaaactctcgaccctg
cggcgatttttgcaatatttcgcgccctatcgccaggaaattcccatcgcgctgctgctg
gtaatgattggcgcagccacacagtctgtcgggccgttgctgattggctgggcgatcgac
aacctgattttgcaaggcgactggccagggctggcgcggctgctggcgctgctggtcgtg
atttacgtgctgggtgtggtggcgattcgcgggcaaatctggcgcatcggcaacatgatg
cagcgggttctggggcaactgcggcaagatttgtttacgaaagtgcagagcctgccggtc
agtttttttgaccgcagcgaggccggcgacctgatgagccgcctgctaaatgacgtaaac
acggtgaaccaggcctttgggctaacggtgccgcaaatgctgggacaaagctttagcctg
atcggcattatcattgccatgctgtcgatgaacctgcaactgggtctgctgagcaatcta
gtagtgcccatgatgattttcaccacgggtttcttttcgcgctgggcgcggcggcgcttt
cgcgtggcgcgggagacgattggcgaactgtcggccaagctggaggaggacattagcagt
gtgcgcgaggcacaggcttttaaccggacgcaattgaatatcgaggaatttgacagcctc
aacgaggcgaatcgccgcgctaacattcaggcagtggcggtgacttctgcgtttttgccg
tcgattgattttctgaacacgctggcaacggcgggcgtgatggcctacggcggctatctg
gcggtgacgggggcgatgtcggtgggtgtggtgacggcgtttttgctgtacgtgcagcag
ttctttcgcccgatccagatcctcagccagttttatacgcaggcgcagtcggggctggca
ggattagaccggatctttttgctgctagatgagccagcgacattgcaggatgcgcccaat
gcgactgagatgccgccgattcgaggagaggtgcggttcgagtcggtgtcctttggctat
acggaaaatcagcgcgtgctgcaagaggtgagcttagtagcagaaccgggacagatggtg
gcgctggtggggccgacgggcgcaggcaaaagcacaattattaatttgattctgcggttt
tatgatgtgacggagggcgcggtaaaaatcgacggcatcgacgtgcgccgcgtgacgcaa
gccagcctgcgccgccagattgggatcgtgctgcaagataacttactctttagcggcacg
gtggcggagaatatcgcctttggtgcgccagatgccagtcagaccgagattgaggcggca
gcccagacggctaatgtgcatgaatttatcacctcgttgccgcagggctacagcacgctg
ttgggtgagcggggcgcaccgctgagccagggacagcgacagttggtcagtattgcgcgg
gcagtgctaattaacccgaagattctgatcctggacgaggcaaccagcagcatcgacaca
cgcactgaagcattggtgcaagaggcgatcgcccgcctgctccaaaaccgcaccagcttc
gtgattgcccaccgccttagcactgtggcccaagccgatcaggtactcgtggttcagcag
gggcagatcgcggaacggggaacccacactgagctgattgcccaaaaaggcatctacgca
aatctgtatgcgctgcaactgggcgcaagttag
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