Leucobacter muris: Leucomu_03985
Help
Entry
Leucomu_03985 CDS
T05802
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
leu
Leucobacter muris
Pathway
leu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
leu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Leucomu_03985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leu03021
]
Leucomu_03985
03400 DNA repair and recombination proteins [BR:
leu03400
]
Leucomu_03985
Enzymes [BR:
leu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Leucomu_03985
Transcription machinery [BR:
leu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Leucomu_03985
DNA repair and recombination proteins [BR:
leu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Leucomu_03985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QAB17192
LinkDB
All DBs
Position
851876..855769
Genome browser
AA seq
1297 aa
AA seq
DB search
MLEGTSFNELQIRLATADDIRSWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRYKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMIIDIDEEGRHEDLAELEAELRLELKALEDQRDIAIAQRQQQAESD
LAALEAEGAKADQRRRAEASAEKEMSAIRKGFDDDIARLQRVWEDFRNLKVGDLKPEDAV
FADLMDRYGDYFEAYMGAEAIKKRLEGFDLEAEAETLHLQIAEGKGQKKIRAIKRLKVVS
AFLQTGASPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLLDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLMDLSHAQNVKAAKRMVERSR
SEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKQDAVGTGR
AFGSIAEAILAMDEGTLDLGAQVKIRLTGYTDANGVTNEKPVLVETSLGRAIFNEALPSD
YPYFERVADKGSLSGLVNDLAERYPKVEVAATLDRVKDAGFYWASRSGVTVSLSDIVTPA
NKGEIIAEHEKRAAKVQRDYDRGMISDGDRRKALTDIWTEATDEVAASMRESFPEDNTIF
RMVSSGARGNWLQIRNIAGMRGLVSNPKGEIIPRPIINSYREGLSVAEYFIATHGARKGL
ADTALRTADSGYLTRRLVDVSQDVIIREEDCGTRRGLDLPIAAADANGVLVRDENVENSV
YARTLATDAVSPEGAVVASAGDDVGDVLIDQLVAAGVTEIKVRSVLTCASAVGVCATCYG
RSLATGQRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFEAR
TPKGASPIAEAAGRITIEDTPKGRSILLTPDDGTEEKQYPVLKRATLLVEDGDHVELGQP
FLAGTLDPKDILQVGSTEEGKHIPGERAVQKYLVEGVQGVYRSQGVPIHDKHIEVIVRQM
LRKVTVVDHGETELLPGELVDRSRYQRINREALLEGKRAATARPEVMGITKASLATESWL
SAASFQETTRVLTQAAMEGSKDPLIGLKENVIIGKLIPAGTGLSTYRDVEVEATEEAKAE
RYPNRLFATEGTFDENDLSFVDFDSFTADEFNPGNYS
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgagggtacgagtttcaatgagctgcagatccgtctggccaccgccgacgacatc
cgcagctggtcgttcggcgaggtcaagaagccggagaccatcaactaccgcacgctgaag
cccgagaaggacggtctcttcggcgagcagatcttcggtcccagccgcgactgggagtgc
gcgtgcggcaagtacaagcgcgtgcgctacaagggcatcgtctgcgagcgctgcggcgtc
gaggtgacgaagtcgagcgtgcgccgcgagcgcatgggccacatcgagctggccgcgccc
gtcacgcacatctggtacttcaagggcgtcccgtcgcgcctgggctacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatgatcatcgacatcgat
gaggagggccgccacgaggatctcgccgagctcgaggccgagctgcgtctcgagctgaag
gcgctcgaggatcagcgcgacatcgcgatcgcgcagcgccagcagcaggccgagtcggat
ctcgccgcgctcgaggccgagggtgcgaaggccgatcagcgccgccgcgccgaggcctcg
gccgagaaggagatgtcggccatccgcaagggcttcgacgacgacatcgctcggctgcag
cgcgtgtgggaggacttccgcaacctcaaggtgggcgacctgaagcccgaggatgcggtg
ttcgccgatctcatggaccgctacggcgactacttcgaggcgtacatgggcgccgaggcg
atcaagaagcgcctcgagggcttcgatctcgaggccgaggccgagacgctgcacctgcag
atcgccgagggcaagggccagaagaagatccgcgccatcaagcgcctgaaggtcgtcagc
gccttcctgcagacgggtgcgagcccggctgcgatggtgctcgacgtcgtgccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggcggtcgcttcgcgacctcggacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtctgcgccgcctgctcgatctc
ggcgcccccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgcggccgccccgtcacgggcaccggcaaccgagccctgaag
tcgctcagcgacatgctcaagggcaagcagggccgcttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatcaagcgcctc
atggatctgtcgcacgcgcagaacgtgaaggccgcgaagcgcatggtcgagcgctcccgc
tccgaggtgtgggacgtgctcgaggagatcatccgcgagcgccccgtgctgctcaaccgc
gcaccgaccctgcaccgcctcggcatccaggcgttcgagccgcagctcgtcgagggcaag
gcgatccagctgcacccgctcgtctgcgccgccttcaacgccgacttcgacggcgaccag
atggccgtgcacctgccgctgtcggtcgaggcccaggccgaggcccgcgtgctcatgctc
gcctcgaacaacatcctgaagccgtcggacggccgcccggtgaccctgccctcgcaggac
atgatcatcggcctgcaccacctcaccacggtcaagcaggacgcggtcggcaccggccgc
gcgttcggctcgatcgccgaggcgatcctggcgatggacgagggcaccctcgacctcggc
gcgcaggtgaagatccgtctcaccggctacaccgatgcgaacggcgtcaccaacgagaag
cctgtgctggtcgagacctctctcggccgcgcgatcttcaacgaggcgctgccgtccgac
tacccctacttcgagcgcgtcgccgacaagggcagcctgtcgggcctggtcaacgacctc
gccgagcgctacccgaaggtggaggtcgccgcgaccctcgaccgggtcaaggacgccggt
ttctactgggcctcgcgctcgggcgtgaccgtgtcgctctcggacatcgtgactcccgcg
aacaagggcgagatcatcgccgagcacgagaagcgcgccgccaaggtgcagcgcgactac
gatcgcggcatgatcagcgacggcgatcgtcgcaaggcgctgaccgacatctggaccgag
gcgaccgacgaggtcgcggcctcgatgcgcgagtcgttccccgaggacaacaccatcttc
cgcatggtgtcgtctggcgcccgcggtaactggctgcagatccgcaacatcgcgggtatg
cgcggtctggtgtcgaacccgaagggcgagatcatcccccgtccgatcatcaactcgtac
cgcgagggcctatcggtggcggagtacttcatcgccacccacggtgcccgcaagggcctc
gccgataccgctctgcgcaccgccgactcgggctacctgacccgtcgtctggtggatgtg
tcgcaggacgtgatcatccgtgaagaggactgcggcacccgtcgcggcctcgacctgccg
atcgccgcggccgacgcgaacggcgtgctcgtgcgcgacgagaacgtcgagaactcggtc
tacgcgcgcaccctcgccaccgacgccgtttcgcccgagggcgccgtcgtcgcgagcgcg
ggcgacgacgtgggcgatgtgctcatcgaccagctggtcgccgccggcgtgaccgagatc
aaggtgcgctccgtgctcacctgcgcctcggccgtgggcgtctgcgccacctgctacggc
cgttcgctcgcgaccggccagcgcgtcgacatcggcgaggcggtcggcatcatcgccgcc
cagtcgatcggcgagcccggcacgcagctgacgatgcgcaccttccacacgggtgggtcg
gcctcggccgacgacatcacccagggtctgccccgcgtgcaggagctcttcgaggcgcgc
acccccaagggcgcctcgccgatcgccgaggccgcgggccgcatcacgatcgaggacacc
ccgaagggccgctcgatcctcctcacgccggacgacggcaccgaggagaagcagtacccg
gtgctgaagcgcgccacgctgctcgtcgaggacggcgaccacgtcgagctcggccagccg
ttcctcgcgggcacgctcgacccgaaggacatcctgcaggtcggctcgaccgaggagggc
aagcacatcccgggcgagcgcgcggtgcagaagtacctcgttgagggcgtgcagggcgtc
taccgctcgcagggcgtgccgatccacgacaagcacatcgaggtgatcgtgcgccagatg
ctgcgcaaggtgaccgtggtggatcacggtgagaccgagctgctgcccggtgagctcgtg
gaccgctcgcgctaccagcgcatcaaccgcgaggcgctgctcgagggcaagcgcgccgcg
accgcccgccccgaggtcatgggcatcaccaaggcctcgctcgcgaccgagtcgtggctg
tcggcggcctccttccaggagaccacccgggtgctcacgcaggcggcgatggagggatcg
aaggatccgctgatcggcctcaaggagaacgtcatcatcggtaagctcatcccggccggc
accggcctgagcacctaccgcgacgtcgaggtcgaggccaccgaggaggcgaaggcggag
cggtacccgaaccgcctgttcgccaccgagggcaccttcgatgagaacgacctgtcgttc
gtggacttcgacagcttcaccgctgacgagttcaacccgggcaactacagctag
DBGET
integrated database retrieval system
