Leucobacter muris: Leucomu_05175
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Entry
Leucomu_05175 CDS
T05802
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
leu
Leucobacter muris
Pathway
leu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Leucomu_05175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leu03019
]
Leucomu_05175
Messenger RNA biogenesis [BR:
leu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Leucomu_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Ph1570
DUF459
Motif
Other DBs
NCBI-ProteinID:
QAB17390
UniProt:
A0ABX5QEA8
LinkDB
All DBs
Position
1105281..1106957
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AA seq
558 aa
AA seq
DB search
MTNPPYAPPKLEKGTLRITPLGGLGEVGRNMTVYEIDGKLLIVDCGVLFPEVQHPGVDLI
LPDISKIEDRLGDIVAVVLTHGHEDHIGGVPYLLKLREDIPLVGSRLTLAFVEAKLKEHR
IRPKTRVVAEGDRVEYGPFDLEFVAVNHSIPDALAVAIRTDAGLVIGTGDFKMDQLPLDG
RITDLRAFAKLGEEGVDLFMTDSTNADVPGFTPLEKNIGPVIEQVIAKTPGKVVVASFSS
HVHRVQQVLDAAHANGRRVVLLGRSMVRNMKIAADLGYLDVPEGVLVDLKKSGDIPDHRI
VYMSTGSQGEPMAVLSRMVNREHQVEVGDGDTVIMASSLIPGNETSVYRVIDGLIKLGAN
VVHKGNAKVHVSGHAAAGELLYCYNIVRPKNVMPIHGEYRMLVANAALAIETGVPQNRTV
IAENGTVVDLADGVARAVGQLDTEFIYVDGKSVGRVTDDDLRDRRTLAEEGFISVITVVE
PTTAHIVSGPDIHAKGVAEEARVFEKIKPQIADALEAAMQDGVTDHHQLQQITRRTIGRW
VGTKLRRKAMIVPVVVVV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaccccccctacgccccgcccaagctcgagaagggcacccttcgcatcacgccg
ctcggcggtctcggcgaggtcggtcgcaacatgaccgtctacgagatcgacggcaagctg
ctgatcgtcgactgcggcgtgctcttccccgaggtgcagcacccgggcgtcgacctgatc
ctgcccgacatcagcaagatcgaggaccgcctgggcgacatcgtcgccgtcgtgctcacg
cacggccacgaggatcacatcggcggcgtgccctacctgctcaagctgcgcgaggacatc
cccctcgtgggctcgcgcctcacgctcgccttcgtcgaggcgaagctcaaggagcaccgc
atccggccgaagacccgcgtcgtcgccgagggcgaccgcgtcgagtacggccccttcgac
ctcgagttcgtcgcggtcaaccactcgatccccgacgccctggccgtcgcgatccgcacc
gacgccggtcttgtgatcggcacgggcgacttcaagatggatcagctgccgctcgacggc
cgcatcaccgacctccgcgccttcgcgaagctgggcgaggagggcgtcgacctcttcatg
accgactcgacgaacgccgacgtgcccggcttcacgccgctcgagaagaacatcggcccc
gtcatcgagcaggtcatcgcgaagacgccgggcaaggtcgtcgtcgcgagcttctcgagc
cacgtgcaccgcgtgcagcaggtgctcgacgccgcccacgcgaacggccgccgcgtcgtg
ctgctcggccgctcgatggtgcgcaacatgaagatcgcggccgacctcggctacctcgac
gtgcccgagggcgtgctcgtggacctcaagaagagcggcgacatcccggatcaccgcatc
gtctacatgtcgaccggttcgcagggcgagccgatggcggtgctcagccgcatggtcaac
cgcgagcaccaggtcgaggtaggcgacggcgacaccgtcatcatggcgtccagtctgatc
ccgggcaacgagacctccgtctaccgcgtgatcgacgggctcatcaagctcggcgccaac
gtggtgcacaagggcaacgcgaaggtgcacgtgtcgggtcacgccgccgcgggcgagctg
ctctactgctacaacatcgtgcgccccaagaacgtcatgccgatccacggcgagtaccgc
atgctggtggccaacgccgcgctcgcgatcgagacgggcgtgccgcagaaccgcaccgtc
atcgccgagaacggtaccgtcgtcgacctcgccgacggcgtcgcccgcgcggtgggccag
ctcgacaccgagttcatctacgtcgacggcaagagcgtcggccgggtcaccgacgacgat
ctgcgggaccgccgcacgctcgccgaggagggcttcatctcggtgatcaccgtggtcgag
cccacgaccgcgcacatcgtgtcgggccccgacatccacgcgaagggcgtcgccgaggag
gcgcgggtcttcgagaagatcaagccgcagatcgccgacgcgctggaggcggccatgcag
gacggcgtgaccgaccaccaccagctgcagcagatcacgcgccgcaccatcggccgctgg
gtcggcacgaagctgcgccgcaaggcgatgatcgtgcccgtcgtggtggtggtgtag
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