Leucobacter muris: Leucomu_06220
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Entry
Leucomu_06220 CDS
T05802
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
leu
Leucobacter muris
Pathway
leu03420
Nucleotide excision repair
leu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Leucomu_06220
03430 Mismatch repair
Leucomu_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leu03400
]
Leucomu_06220
Enzymes [BR:
leu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Leucomu_06220
DNA repair and recombination proteins [BR:
leu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Leucomu_06220
MMR (mismatch excision repair)
Other MMR factors
Leucomu_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
QAB17573
LinkDB
All DBs
Position
1308497..1312012
Genome browser
AA seq
1171 aa
AA seq
DB search
MTRDPMARALPEPPVFSASRIAEILAVPPKPALVPTDEQRAVIEHPLGGSTLVVAGAGSG
KTETMANRVVWLVANGLVEPDQVLGLTFTRKAAGELRERISGRIDAFVERVRDAAQRGAL
SPGEAERASVLAEQLADGLDLPDVSTYNSFAAGVLQEFGAAAGIAPGAAVIDEATAWRIA
RDTVIASRDPELATSELSLPQLIRHLLNLDHAVSDHLTSLDRVDRVVEEFGRVIHLPYNE
KELGGEPSGKVYAPVRDAVASLAETPLITRLAREYAAEKQRRGVIEFSDQLALATLALER
SADAVAVLRRRHRAVLLDEVQDTSVGQTRFLSRIFAGGSVMAVGDPHQSIYGWRGASAEG
LQSFHSDFRGRGPSDGGTAPATLTLSTSWRNPDRVLDAANVIAAPLAADAAIDVPGLAPR
PGAAEGSIEWRYPETAHEERAAVAQWMRETRDAHLAEHGEPPTAAVIFRTRSPMAAFSAA
LTDAGVPNRIIGLGGLLTTPEVTDVVSTLRCIWYADAGSDLIRLLTGPRFRVGVADIAGL
RDAARWFARRDVSQQPLSDEDRAEDRVLPDPDRQFTLIDALDQIATMRSLDHAALRGVSE
AGRERLRDAGRMLAALRRGVGGSIPELIGATVQGLRLDIELDANEAREHAGGSAAHANLD
IFTELVESYLSVDSRGTLASLLEWIERAVEADETAEHVAAPAPGTVQLITAHGSKGLEWD
LVAVPRLVVGEFPSSPRSGAGWLRTGELPDELRGDAAARPELNWRIADTQQELRDRIASY
REQLRDRHHDEERRLAYVAVTRSASRLLLSGAFWGGQTRPRTPSPYLLELQQAGIIAGLP
EQSAHESDPSELAELALQWPLDPLGAREPAVMRAAAAVQAAIDGRDEGRDPLDDPDLDET
VRLLLAERRDGSPVGGGAPAQAGAPGAAADPRSGAGAHAGAGADSGAGADAPPERGLPER
ITASTFHEFIDDPALAERRRRRPVPQRPYRRTRIGNRFHEWVERRATTARGTALPLTGLD
LEGWEPELAEFDGEAELRPLIEQFEQSRWAGLQPIAVEQEVTLPFAGRTLVCKLDAVYRF
PGHGGAADRFEIVDWKAGRSPRTDAERESRFFQLDLYRHAYAQWAGVDPGRIDVSLFYVA
EGVELTGSRPRSLEELEEIWSSAAARLRPAP
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgatccgatggcgcgcgcgctccccgaaccccccgtcttctccgcctcgcgc
atcgccgagatactggccgtgccgcccaaaccggctctcgtgccgaccgacgagcagcgc
gccgtcatcgagcacccgctcggtggcagcaccctcgtcgtggccggagccggcagcggc
aagaccgagacgatggccaaccgggtggtctggctcgtcgcgaacggccttgtcgagccc
gatcaggtgctcgggctcaccttcacccgcaaggccgcgggcgaactccgcgagcgcatc
tcgggcaggatcgacgcattcgtcgagcgggtgcgcgatgcggcgcagcggggggcgctt
tcgccgggcgaggccgaacgcgcctcagtgctcgccgagcagctcgccgacggcctcgat
cttcccgacgtgagcacctacaactccttcgcggcaggtgtgctccaggagttcggggcg
gccgcgggcatcgcaccgggagccgcggtcattgacgaggcgaccgcctggcgcatcgcg
cgagacaccgtgatcgcgagccgcgatcccgaactcgccacgagcgagctcagcctgccc
cagctcatccgccacctgctgaacctcgaccacgcggtctcggaccacctcacctcgctc
gaccgcgtcgaccgcgtcgtcgaggagttcgggcgcgtgatccatctgccctacaacgag
aaggagctcggcggcgagccgagcggcaaggtctacgcgccggtgcgcgacgcggtcgcg
agtctcgcagagaccccgctcatcacccgcctcgcccgcgagtatgcggccgagaagcag
cgcagaggcgtcatcgagttctccgaccagctcgccctcgccacgctggcgctcgagcgc
tccgccgatgcggtcgccgtgctgcgccgcaggcaccgcgcggtgctgctcgacgaggtg
caggacacctcggtggggcagacccggttcctctcgcgcatcttcgcaggcggttccgtc
atggcggtgggcgacccgcaccagtcgatctacggctggcgaggcgcctcggccgagggg
ctgcagtcgttccactccgatttccggggtcgcggaccctccgacggcggcacagccccc
gccaccctcacgctctccacgagctggcgcaaccccgaccgcgtgctcgacgcggcgaac
gtcatcgccgcgccgctcgccgccgacgccgcgatcgacgtgccggggctcgcgccgcga
cccggcgcagccgagggctccatcgagtggcggtaccccgagacggcccacgaggagcgc
gccgcggtggcgcagtggatgcgcgagacgcgcgacgcccacctcgccgagcacggagag
ccgcccacggccgcggtcatcttccgaacgcgcagcccgatggccgccttctcggccgcg
ctcaccgatgcgggcgtgcccaaccgcatcatcggcctcggcggcctcctcaccacaccc
gaggtcaccgacgttgtgagcaccctgcgctgcatctggtatgccgacgccggcagcgac
ctcatccggctgctcaccgggccgcgcttccgcgtcggcgtcgccgacatcgccggactg
cgcgacgcggcccgctggttcgcgcggcgcgacgtctcgcagcagcccctcagcgacgag
gaccgcgccgaggaccgcgtgctgcccgaccccgaccggcagttcaccctcatcgacgcg
ctcgaccagatcgccaccatgcgcagcctcgaccacgcggcgctgcgcggcgtcagcgag
gccgggcgcgagcggctgcgcgacgccggccgcatgctcgcagcactgcgccggggggtc
ggaggcagcatccccgaactcatcggagcgaccgtgcaggggctgcggctcgacatcgag
ctcgacgccaacgaggcgcgcgagcacgccgggggctcggcggcgcacgccaacctcgac
atcttcacggagctcgtcgagagctacctctcggtcgacagccgaggcacgctcgcgtcg
ctgctcgagtggatcgagcgggcggtcgaggccgatgaaaccgccgagcacgtcgcggca
cccgcccccggcaccgtgcagctcatcaccgcccacggttcgaagggcctcgaatgggac
ctcgtcgccgtgccccgcctcgtcgtgggcgagttcccgtcgagcccccgcagcggcgcc
ggctggctgcgcaccggagaactgcccgacgagctgcgcggcgacgccgccgcacgcccc
gaactgaactggcgcatcgccgacacgcagcaggagctgcgcgaccgcatcgcctcctac
cgcgaacagctgagagaccggcatcacgacgaggagcgccgcctcgcctacgtcgcggtg
acccgttcggcgagccggctgctgctcagcggtgccttctggggcgggcagacccgacct
cgcacaccgtcgccctatttgctcgaactgcagcaggccggcatcatcgcggggctgccc
gagcagagcgcccacgagtccgaccccagcgaactcgccgagctcgccctgcagtggccg
ctcgatcccctcggcgcccgcgaacccgccgtgatgcgcgcagccgcagcggtgcaggcc
gccatcgacgggagagacgagggccgggatccactcgacgaccccgacctcgacgagacc
gtgcgattgctgctcgccgagcgccgagacggctcaccggtcggcggcggcgcaccggcc
caggcgggcgccccgggcgcggccgccgacccccgctcaggtgccggagcccacgccggg
gccggagcggactccggggccggagccgacgctccgccggagcgaggcctgcccgagcgc
atcacggcctcgaccttccatgagttcatcgacgatccagccctcgcggaacggcgcagg
cggcgacccgttcctcagcggccctaccggcgcacccgcatcggcaaccgcttccacgag
tgggtcgagcggcgcgccacgactgcgcggggcaccgcgctgccgctcaccgggctcgac
ctcgaggggtgggaacccgaactcgccgagttcgacggcgaagccgaactgaggcccctg
atcgaacagttcgagcagtcgcgatgggcggggctgcagcccatcgccgtcgagcaggag
gtcacgctgcccttcgccggccgcacactcgtctgcaagctcgacgccgtctaccggttc
cccgggcacggcggcgcagccgaccgcttcgagatcgtcgactggaaggcgggccggtcg
ccgcgcaccgacgccgagcgcgagagccgcttcttccagctcgatctctaccggcacgcc
tacgcgcagtgggccggcgtcgatcccgggcgaatcgatgtctcgctgttctacgtcgcc
gagggcgtcgaactcaccggcagtcgaccgcgcagcctcgaagaactcgaagagatctgg
agctccgccgcagcgcgcctgcgccccgcgccgtag
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