Leucobacter muris: Leucomu_06920
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Entry
Leucomu_06920 CDS
T05802
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
leu
Leucobacter muris
Pathway
leu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
leu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Leucomu_06920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leu03400
]
Leucomu_06920
Enzymes [BR:
leu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Leucomu_06920
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Leucomu_06920
DNA repair and recombination proteins [BR:
leu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Leucomu_06920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
NFACT_N
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
QAB17688
LinkDB
All DBs
Position
1468062..1469048
Genome browser
AA seq
328 aa
AA seq
DB search
MPELPEVEVVRAGLAPAVTGARIVAAEVRDPRALKRHLPLGLDGLPFDDGLGGHSVTLPV
EAGLSRSADFERRVTGLRLAAPQRRGKFMWIPVANPNGGAPGSALLAHLGMSGQLLLRSL
EAPDDRHVRVRLWIEHPEHGDLRLDFADQRLFGSLALDALVEAAGGGAIPSQARHIARDP
LDPLFDDIGFIAALRSRSAGVKKLLLDQGLVSGVGNIYADEALWRARLHPETAGTSVGPR
KARELLAALRDVFAKALAEGGTSFDAQYVNVNGQAGYFAHSLNAYGRTGQPCPRCGGPIR
RIVIGGRSSHFCSRCQKRGSAPRSRTSV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaactgcccgaagtcgaggtggtgcgcgccggcctcgcccccgccgtgacgggt
gcgcggatcgtcgccgccgaggtgcgtgacccccgcgcgctcaagcggcacctgccgctc
ggcctcgacggactgcccttcgacgacggcctcggcgggcacagcgtcaccctgcccgtc
gaggcgggcctgtcgcgctcggccgacttcgagcgccgggtcaccggtctccggctcgcc
gcgccgcagcggcgcggtaagttcatgtggatccccgtagcgaacccgaacggcggcgct
cccggatcggcgctcctcgcgcacctcggcatgagcgggcagctgctgctgcgctcgctc
gaagcgcccgacgaccggcacgttcgcgtgcggctctggatcgagcaccccgagcacggc
gacctgcgtctcgatttcgccgaccaacggctcttcggctcgctggcgctcgacgcgctc
gtcgaggccgcgggcggcggcgcgatcccgagccaggcgcgccacatcgcgcgcgacccg
ctcgatccgctcttcgacgacatcggcttcatcgcggcgctgcgctcccgcagcgccggt
gtgaagaagctgctgctcgaccaggggctcgtgagcggcgtcggcaacatctacgccgac
gaggccctgtggcgggcgcgactgcaccccgagacggcgggcacgtcggtcgggccgcgc
aaggcccgcgagctgctcgccgcgctgcgcgacgtgttcgcgaaggcgctcgccgagggc
ggcacgagcttcgacgcccagtacgtcaacgtgaacggtcaggcgggttattttgcgcac
tcgctcaacgcctacggccgcaccgggcagccgtgcccgcgctgcggggggccgatccgg
cgcatcgtcatcggcggacgctcctcgcacttctgctcgcggtgccagaaaaggggctcc
gccccgcggtcccgcacctctgtctga
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