Leucobacter muris: Leucomu_11410
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Entry
Leucomu_11410 CDS
T05802
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
leu
Leucobacter muris
Pathway
leu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
leu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Leucomu_11410
09124 Replication and repair
03420 Nucleotide excision repair
Leucomu_11410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leu03021
]
Leucomu_11410
03400 DNA repair and recombination proteins [BR:
leu03400
]
Leucomu_11410
Enzymes [BR:
leu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Leucomu_11410
Transcription machinery [BR:
leu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Leucomu_11410
DNA repair and recombination proteins [BR:
leu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Leucomu_11410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
QAB18442
LinkDB
All DBs
Position
2435485..2437161
Genome browser
AA seq
558 aa
AA seq
DB search
MTLGPLIVQSDHTVLLEVAHPDAEDARHELAVFAELERAPEHIHTYRVTRLGLWNARAAG
HTAEEILGTLNRYAKFPVPAGVASEIEDTMRRYGRLTIERLSSDEAPASPSADDTAAPQL
VLRSDDPAILREVTSAKKIAPLLGNRIDERTYPLEPWARGELKQQLVSRGWPAEDLAGYT
PGEPYGIDLEQQGWHLRDYQAKAVEAFQRGGSGVVVLPCGAGKTIVGAAAMAEVGAKTLI
LVTNAVSARQWRDELLRRTSLTEDEIGEYSGQVKEIRPVTIATYQILTSRRKGEYQHLSL
LDAEDWGVIVYDEVHLLPAPVFKLTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYD
AAWKDIEAQGFIAPAACFEVRVELPESERMDYAVAEDQDRYRIASSTPEKQRIAQRIIEK
HPGESVLVIGQYIDQLEAMSDALGAPLITGQTPVDEREQLFQAFRSGEERILVVSKVANF
SVDLPDASVAIQISGSFGSRQEEAQRLGRLLRPKAAGITASFYTLIARDTVDQDFAQNRQ
RFLAEQGYSYTILDAHEV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgactctcgggcccctcatcgtgcagagcgaccacaccgtgctcctggaggtcgcgcac
cccgacgcagaagacgcccgccacgagctcgccgtcttcgccgagctcgagcgcgccccc
gagcacatccacacctaccgggtcacgcggctcggcctctggaacgcgcgcgccgccggg
cacaccgccgaagagatcctcggcacgctgaaccgctacgccaagttccccgtgcccgcc
ggggtcgcgagcgagatcgaggacacgatgcgccgctacgggcgcctcaccatcgagcgc
ctctcgagcgacgaggcgccggcctccccgtccgccgacgacaccgcggccccgcagctc
gtgctgcgctccgacgacccggcgatcctgcgcgaggtcaccagcgcgaagaagatcgcc
ccgctgctcggcaaccgcatcgacgagcgcacctacccgctcgagccctgggcgcgcggc
gaactcaagcagcagctcgtgtctcgcggctggcccgccgaggatctcgcgggctacacc
cccggcgaaccctacggcatcgacctcgagcagcagggctggcacctgcgcgactaccag
gccaaggcggtcgaggcgttccagcgcggcggctcgggcgtggtcgtgctgccgtgcggc
gccggcaagacgatcgtgggtgcggcggcgatggccgaggtgggggcgaagacgctgatc
ctcgtcaccaacgcggtctcggctcgccagtggcgcgacgagctgctgcgccgcacctcg
ctcaccgaggacgagatcggagagtactccgggcaggtcaaggagatcagaccggtcacc
atcgccacctaccagatcctcacgagccgacggaagggcgagtatcagcacctctcgctg
ctcgacgccgaagactggggcgtgatcgtctacgacgaggtgcacctgctgccggccccc
gtattcaagctcaccgccgacctgcaggcgcgccgccgcctcggcctcaccgccacgctc
gtgcgcgaggacggtcgcgagggcgacgtgttcagcctgatcggcccgaagcgctacgac
gccgcgtggaaagacatcgaggcgcagggcttcatcgcccccgccgcgtgcttcgaggtg
cgggtcgagctgcccgagtcggaacgcatggactacgcggtcgccgaggatcaggatcgc
taccgcatcgcctcgtcgacccccgagaagcagcgcatcgcgcagcgcatcatcgagaag
caccccggcgagagcgtgctcgtgatcggccagtacatcgaccagctcgaggcgatgtcc
gacgcgctcggggcgccgctcatcaccggccagacccccgtcgacgagcgcgagcagctc
ttccaggcgttccgcagcggcgaagagcggatcctcgtcgtctcgaaggtcgcgaacttc
tcggtcgaccttcccgacgcgtcggtcgcgatccagatctcgggatcgttcggctcgcgc
caggaggaggcgcagcgcctcggccgtctgctgcgccccaaggccgccggcatcacggcg
tcgttctacacgctcatcgcgcgcgacaccgtcgaccaggacttcgcgcagaaccgccag
cgattcctcgccgagcaggggtacagctacacgattctcgacgcgcacgaggtgtag
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