Leucobacter sp. HNU: AB3K78_00790
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Entry
AB3K78_00790 CDS
T11231
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
leuc Leucobacter sp. HNU
Brite
KEGG Orthology (KO) [BR:
leuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leuc03032
]
AB3K78_00790 (topA)
03400 DNA repair and recombination proteins [BR:
leuc03400
]
AB3K78_00790 (topA)
Enzymes [BR:
leuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB3K78_00790 (topA)
DNA replication proteins [BR:
leuc03032
]
Prokaryotic type
DNA Topoisomerases
AB3K78_00790 (topA)
DNA repair and recombination proteins [BR:
leuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB3K78_00790 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XOU92447
LinkDB
All DBs
Position
157691..160522
Genome browser
AA seq
943 aa
AA seq
DB search
MGAAKKLVIVESPTKAKTIGGYLGDDYEVIASVGHVRDLAEPSELPSELKKGPFGKFAVD
VDNGFAPYYVVADNKKKTVSELKRALKGADELWLATDEDREGEAIAWHLLEVLKPKVPVR
RMVFHEITKEAIEQAKANTRDLDIALVDAQETRRILDRLYGYDISPVLWRKVAPKLSAGR
VQSAATRLVVDRERERLAFVSAEYWDITATFTPEAGATDSTPFAARLVRVDGQRLATGGD
FADDGTLTPRAAKAGVIGLEQARAERLASALAAGAPARVRSVETKPHTRRPAAPFTTSTL
QQEASRKLRYSSRQTMSFAQSLYENGYITYMRTDSPSLSGQAIRAARTQAAELYGAQTVP
EKPRVYTGKAKGAQEAHEAIRPAGDVFQRPSALKGKLTQGEYALYELIWKRTVASQMADA
KGSTDTVTVGVEVAEPGEARATDTEFTASGTVITFPGFLLAYEEGRDEKRGDNEQNVALP
QLAESQALGVTEPEAKGHETSPPPRYTEASLTKRLEELGIGRPSTYAAIISTIMDRGYVA
KKGQALVPSWIAFSVVRLLEEHFAALVDYDFTAEMENDLDRIAAGDADRSAWLSEFYFGS
DAHPGLRGVVDNLGEIDARAINTIKIDDEISLRNGKYGPYLEVFDDKCEVGEDGALKPRS
VNIPDGLAPDELTPAKAHELADAEPAEDRVVGLHPKTGKRIVAKNGRFGPYVTELLDDGE
ELPKGQKPRTASLFKSMDPATIELDAAVALLDLPRVVGVDPESNAEITAQNGRYGPYLKK
GTDTRTLPSEDAIFSIDLAGAQELFAQPKYGARRASSALKEFDADPVSGKPIKVRDGRFG
PYVTDGETNATIPRGDSVEDITFERAVELLAIKRAKGPAKRKAPAKKAPAKKAPAKKTAA
AKKTAAASGTKKAVDPARSAAAKKAAATRAAKKAAAEQAAAGA
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
gtgggggccgcgaagaaactcgtgatcgtcgagtcgccgaccaaggcgaagaccatcggc
ggatatctcggcgacgactacgaagtgatcgcctcggtcgggcacgtgcgcgacctggcg
gaaccgtcggagctgcccagcgagctgaagaagggacccttcggcaagttcgccgtcgac
gtcgacaacggtttcgctccgtactacgtcgtcgcagacaacaagaagaagacggtcagc
gagctcaagcgggcgctcaagggagcggacgagctgtggctcgccactgatgaggaccgc
gaaggagaagcgatcgcgtggcacctgctcgaggtgctcaagcccaaggtgcccgtgcgc
cgcatggtgttccatgagatcaccaaggaagcgatcgagcaggccaaggcgaacacgcgc
gatctcgatatcgcgctcgtcgacgcgcaggagacccggcgcattctcgaccgactgtac
ggctacgacatctcgccggtgctctggcgcaaggtcgccccgaagctctccgcaggccgc
gtgcagtccgccgcgacccggctcgtcgtcgatcgcgagcgcgagcgactcgcgttcgtc
tccgccgaatactgggacatcacggcgaccttcacccccgaggccggcgccaccgattcg
accccgttcgccgcacgactcgtccgcgtcgacggtcagcgcctcgcgacgggcggcgac
ttcgccgacgacggaaccctgaccccgcgcgcggcgaaggcaggcgtcatcggtctggaa
caggcgcgcgcagaacggctggcctccgcgctcgccgcaggcgcaccggcacgggtccgt
tcggtcgagaccaagccgcacacccggcgcccggccgcaccgttcaccacctcgaccctg
cagcaggaagcctcccgcaagctccgctacagctcgcgtcagaccatgtcgttcgcccag
tcgctctacgagaacggctacatcacctatatgcgaaccgactcgccgtccctctcgggg
caggcgatccgggcggcgcgcactcaggccgccgagctctacggtgcgcagacggtcccc
gagaagccgcgcgtctacaccggcaaggccaagggcgctcaggaagcgcacgaggccatc
cggcccgcgggcgacgtcttccagcgaccgagcgcgctgaagggcaagctcacgcagggg
gagtacgcgctctacgagctcatctggaagcgcaccgtcgcgagccagatggccgacgcc
aagggctccaccgacaccgtgaccgtgggcgtcgaggtcgcggagcccggggaagcccgg
gcgaccgacaccgaattcacggcgagcggcaccgtcatcacgttccccggcttcctgctg
gcgtacgaggagggccgcgacgagaagcgcggcgacaacgagcagaacgtggcgctgccc
caactggcagagtcccaggcgctcggcgtgaccgagcccgaggccaaggggcacgagact
agtccgcccccgcgctacaccgaggccagcctcaccaaacggctcgaagagctcggcatc
ggccgtccctcgacctacgcggccatcatcagcacgatcatggatcgcggctacgtggcc
aagaaggggcaggcgctcgtgccgagctggatcgccttctcggtggtccgcctgctcgag
gagcacttcgccgcactggtcgattacgacttcaccgcggagatggagaacgacctcgac
cggatcgcagccggcgatgcggaccgtagcgcttggctcagcgagttctacttcgggagc
gacgcccaccccggtctgcgcggcgtcgtcgacaacctcggcgagatcgacgcgcgagcg
atcaacacgatcaagattgacgacgagatctcgctgcgcaacggcaagtacggtccctac
ctcgaagtcttcgacgacaaatgcgaagtcggcgaagacggcgcgctcaagccgcgcagc
gtcaacatccccgacgggctcgcacccgacgaactcacgcccgcgaaggctcacgagctc
gccgacgcggaacccgcagaggaccgcgtggtcgggctgcacccgaagacgggcaagcgg
atcgtggcgaagaacggccgcttcggcccctacgtcaccgagctgctcgacgacggcgag
gagctgccgaaggggcagaagccgcgcacggcctcgctcttcaagagcatggaccccgcc
acgatcgaacttgacgcggccgtcgcgctgctcgacctgccgcgcgtcgtcggcgtcgac
cccgagtcgaatgccgagatcaccgcgcagaacggccgctacggcccctacctcaagaag
gggaccgatacccgaacgctgccgagcgaggacgcgatcttctcgatcgacctcgccgga
gcgcaggaactgttcgcgcagcccaagtacggcgcgcgccgcgcttccagcgccctgaag
gaattcgacgcggacccggtcagcggcaaacccatcaaggtgcgggacgggcgcttcggc
ccctacgtcaccgacggcgagaccaacgcgacgatcccgcgcggcgacagcgtcgaggac
atcaccttcgagcgagccgtcgagcttctcgcgatcaagcgagccaaggggcccgccaag
cgcaaggccccggccaagaaggccccggccaagaaggcgccggccaagaagaccgcggcc
gcgaagaagaccgctgcagcgtccggaacgaagaaggcggtcgatcccgcccgatccgcc
gccgcgaagaaggccgccgcgacccgggccgcgaagaaggccgccgccgagcaggccgcc
gccggagcgtga
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