Leucobacter sp. HNU: AB3K78_01700
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Entry
AB3K78_01700 CDS
T11231
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
leuc Leucobacter sp. HNU
Brite
KEGG Orthology (KO) [BR:
leuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
leuc03016
]
AB3K78_01700 (truB)
Enzymes [BR:
leuc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AB3K78_01700 (truB)
Transfer RNA biogenesis [BR:
leuc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AB3K78_01700 (truB)
Prokaryotic type
AB3K78_01700 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XOU92609
LinkDB
All DBs
Position
348573..349544
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AA seq
323 aa
AA seq
DB search
MHAESAGTAPQKTDAPNGILLVDKAETWTSHDAVAKTRRALGLKKVGHAGTLDPMATGLL
VLGTGPATRLLTHLVGLDKVYATTIRLGIATVTDDRESEAIGIADPAAIAALAQAPERIR
AAAAELTGAIEQSPSAVSAIKVDGRRAYDRVRAGETVELKKRPVTVHRFELGEPRIATGP
GGEPVIDVDAVVECSSGTYIRALARDLGAALGVGGHLTALRRTEVGPFSVADAVSTERLA
AGDPGPLLTPTEVAARLFPVVRLTAAQAVDLGNGKRLEVDAPDTKLAAAVAPDDRLIGLV
EVKRGRTRVVTNFPVPVDGNSAA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccgagagcgcggggaccgccccgcagaagactgacgcccccaacgggatcctg
ctcgtcgacaaggccgagacctggacgagccatgacgcggtcgcgaagacccgacgcgcg
ctcggcctcaagaaggtcggccacgcgggcacgctcgacccgatggcgacggggctgctg
gtgctcggcacaggcccggcgacccgactgctcacgcacctggtcgggctcgacaaggtc
tatgccacgaccatccgcctcgggatcgcgaccgtcaccgacgaccgcgagagcgaggcg
atcgggatcgccgaccccgccgccatcgcggccctcgcgcaagcgccggaacggatccgc
gccgccgccgccgagctcaccggtgcgatcgagcagtcgccgagcgccgtgagcgcgatc
aaggtcgacggccggcgcgcctacgaccgggtgcgggccggcgagaccgtcgagctcaag
aagcgaccggtcaccgtgcaccgcttcgagctgggcgagccccgcatcgcgacgggaccg
ggcggggagcccgtgatcgacgtcgacgcggtggtggagtgctcctcgggcacctacatt
cgagcgctcgccagggacctcggcgcggcgctcggcgtcgggggccacctcaccgccctc
cgccgcaccgaggtcggcccgttctcggtcgccgacgcggtgagcaccgagcggctggcg
gcgggcgaccccggcccgctgctcaccccgaccgaggtggccgctcggctgttcccggtg
gtgcggctcaccgcagcacaggccgtcgatctcggcaacggcaagcggctcgaggtcgat
gcgcccgacacgaagctcgccgcggccgtcgctcccgacgaccgcctcatcggcctcgtc
gaggtcaagcgcggacgcacccgagtcgtcacgaacttcccggtgcccgtcgacgggaac
agtgcggcatga
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