Leucobacter sp. HNU: AB3K78_01845
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Entry
AB3K78_01845 CDS
T11231
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
leuc Leucobacter sp. HNU
Pathway
leuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3K78_01845 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leuc03019
]
AB3K78_01845 (recQ)
03400 DNA repair and recombination proteins [BR:
leuc03400
]
AB3K78_01845 (recQ)
Enzymes [BR:
leuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB3K78_01845 (recQ)
Messenger RNA biogenesis [BR:
leuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AB3K78_01845 (recQ)
DNA repair and recombination proteins [BR:
leuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AB3K78_01845 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ_Zn_bind
Helicase_C
HRDC
Hydant_A_N
Motif
Other DBs
NCBI-ProteinID:
XOU92635
LinkDB
All DBs
Position
378183..380000
Genome browser
AA seq
605 aa
AA seq
DB search
MTQRDPRTVLSEVFGYEAFRGDQEEIIRHVAAGGDAVVLMPTGGGKSLCYQIPAICRDGT
GIVLSPLVALMHDQVAALRLAGVRAGALNSAMEPEERREVERAYRDGELELLYLAPERLS
APGTVELLQQGRIALFAIDEAHCVSQWGHDFRPDYLRLGALAELWPEVPRIALTATATPA
THRELTERLHLDRARHFVSSFDRPNIRYRIEPKAQVRQQLVRFIREEHADEAGIVYALSR
KRVEQTAAQLREAGIDAVPYHAGLPAEERFAAQTRFLREDGVVVVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPSEAWMAYGLADVVQQRQFIESSDGDAAAQRNQI
EHLNHMLALCETTSCRRVYLLRYFGEETGQPCGNCDVCLDPPKLWDATIPAQKLLSTIVR
ISKERGRTYAAGQHIDVLRGVGSERATQMRLDELSTWGIGQDPTVAQWRGVVRHLIATGL
IESRGEWGVLVPTEASRAVLYGGERVEMREEVLAQKRGGSGGAKAKAAQDLEPAQLERFE
RLRAWRSAEAKEQGVPGYIVFGDATLRALAVHVPGSRDALLGITGIGQAKLDRYGDAVLE
VLSEA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagcgcgatccgcggaccgtcctctccgaggtcttcggctacgaggcgttccgg
ggcgaccaggaggagatcatccgccacgtcgccgcgggcggcgacgccgtcgtgctcatg
ccgacgggcggcggaaaatcgctctgctaccagatccccgcgatctgccgcgacggcacc
ggcatcgtgctgtctccgctcgtggcgctcatgcacgaccaggtggcggcgctgcggctc
gccggcgtgcgagcgggggcgctcaactcggcgatggaacccgaggagcggcgcgaggtc
gagcgcgcgtaccgcgacggggagctcgaactgctctacctggcgcccgagcgcctgagc
gctcccggcaccgtcgagctgctgcagcagggccgtatcgcgctcttcgccatcgacgag
gcccactgcgtctcgcagtgggggcacgatttccgccccgactacctgcggctcggagcg
ctcgcggaactgtggcccgaggtgccccgtatcgcgctgaccgcgaccgcgactccggcc
acgcaccgcgagctgaccgagcggctgcacctggaccgcgcgcggcacttcgtgtcgagc
ttcgaccggccgaacatccgctaccggatcgagccgaaggcgcaggtgcggcagcagctc
gtccgcttcatccgcgaggagcacgcggacgaagcgggcatcgtctacgcgctcagccgc
aaacgggtcgagcagaccgccgcccagctgcgcgaggccgggatcgacgccgtgccgtac
cacgcgggcctgcccgcagaggagcgtttcgcggcgcagacccggttcctgcgcgaggac
ggcgtcgtcgtggtcgcgacgatcgccttcggcatggggatcgacaagcccgacgtgcgc
ttcgtcgcccacatcgatctgccgaagtcggtcgagggctactaccaggagaccggtcgc
gcgggtcgcgacgggctcccgtcggaggcctggatggcctatggtctcgccgatgtcgtg
cagcagcggcagttcatcgagtcctcggacggcgatgcggccgcgcagcgcaatcagatc
gagcacctgaaccacatgctcgcactgtgcgagacgacctcctgccgccgcgtctacctg
ctccgctacttcggcgaggagaccgggcagccgtgcggcaactgcgacgtctgcctcgac
ccgccgaagctgtgggacgcgacgatcccggcgcagaagctgctgtcgaccatcgtgcgc
atctcgaaggaacgcggccgcacctacgcggcggggcagcacatcgacgtgctccgcggc
gtcggctcggagcgggcgacgcagatgcgcctcgacgagctctcgacctggggcatcggg
caggaccccacggtcgctcagtggcgcggcgtcgtgcggcacctcatcgcgacggggctc
atcgagagccgcggggaatggggcgtgctcgtgcccaccgaggccagccgcgccgtgctc
tacggcggcgagagggtcgagatgcgcgaggaggtgctcgcgcagaagcgcggcggctcc
ggcggggcgaaggcgaaggcggcccaggatctggaacccgcgcagctcgaacgcttcgag
cgcctgcgcgcgtggcgcagcgcggaggccaaggagcagggcgtgccgggatacatcgtc
ttcggcgatgcgaccctgcgcgcactcgcggtgcacgtcccgggcagccgcgatgcgctg
ctgggcatcaccgggatcgggcaggcgaagctcgaccgctacggcgatgcggtgctcgag
gtgctgtcggaggcgtga
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