Leucobacter sp. HNU: AB3K78_03450
Help
Entry
AB3K78_03450 CDS
T11231
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
leuc Leucobacter sp. HNU
Pathway
leuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB3K78_03450 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leuc03021
]
AB3K78_03450 (rho)
03019 Messenger RNA biogenesis [BR:
leuc03019
]
AB3K78_03450 (rho)
Transcription machinery [BR:
leuc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AB3K78_03450 (rho)
Messenger RNA biogenesis [BR:
leuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB3K78_03450 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
AAA_25
NACHT
PIP5K
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
XOU92907
LinkDB
All DBs
Position
715511..717478
Genome browser
AA seq
655 aa
AA seq
DB search
MEQNSEETTAAPAADAAPAEAAAPTRRRTSRRVSAAAGAPVEAPAEAAPATEAPAAEEAP
KKRATRSRKKAADAEAPAEVPAAETAAAEAPAEAAPAKTRRTRAAKAAAEAPAAEAPAAD
AAEAPAAEEAPKKRATRSRKKAADAEVPAEAPAADAAASDAKPADAAEPAPAEATKNEQP
DAGEAKTGEGEAGGSRSRNRRGRNKQNTDAAKGEAQSADAETEASDASEKSNGRGNGNGR
GGNGAASAEGNARSSRTRQRERKRRGQGDDLEPELTEDDVLLPIAGVLDVLDNYAFVRTT
GYLPGTGDVYVSLGQVKKYHLRKGDAIVGAIRQPREGEGGGRQKYNAIVKIDSVNGRTLE
ENENRVDFADLTPISPQERLRLETGAEQLTQRVVDLIAPIGKGQRGLIVAPPKAGKTVVL
QQIADAVSKNTPDAHLMVVLVDERPEEVTELQRSVNGEVIASTFDRPAEDHTTVAELAIE
RAKRLVELGHDVVVLLDSLTRLGRAYGAASPASGRSFGGVLDAAALAPAKKLFGAARNIE
NGGSLTIIATALVETGAKADEVVLEEFAGTANMELRLVREIADKRIFPAVDLNASSTHRE
EVLMGADELQATWKLRRALGDTDREQALESVLQKLRDTSSNAEFLLLMQKSQGLA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
gtggagcagaactccgaagagaccacggctgcgcccgcagccgatgccgcgcccgccgag
gcggcggctcccacccggcgccgcacctcgcggcgcgtgagcgcagcggccggagccccg
gtcgaggcgcccgccgaggccgcgcccgcaaccgaggcgcccgccgcggaggaagcgccg
aagaagcgcgccacccgcagccgcaagaaggccgccgacgccgaggctccggccgaggtg
cccgctgccgagaccgctgcagcggaggcgccggcggaggccgcaccggccaagacccgc
cgcacccgcgccgcgaaggccgccgccgaggcacccgccgcggaggcgcccgccgccgat
gccgcagaggcgcccgccgcggaggaagcgccgaagaagcgcgccacccgcagccgcaag
aaggccgccgacgccgaggttccggcggaggcccccgcggccgacgcggccgcgtccgac
gcgaagccggcggatgccgccgagcccgctccggccgaggccaccaagaacgagcagccc
gacgccggcgaggccaagaccggcgagggcgaggccggcggcagccgcagccgcaaccgt
cgcggccgcaacaagcagaacaccgacgcagccaagggcgaggcgcagagcgcggacgcc
gagaccgaggcctcggacgcctcggagaagtcgaacggtcgcggcaacggcaacggccgt
ggcggcaacggcgccgcgagcgccgagggcaatgcgcggtcgagccgcacccggcagcgc
gagcgcaagcgtcgcggccagggcgacgatctcgagcccgagctgaccgaggacgacgtc
ctgctgccgatcgccggcgtgctcgacgtgctcgacaactacgcgttcgtgcgcaccacc
ggctacctgcccggcaccggcgacgtctacgtctcgctcggccaggtcaagaagtaccac
ctgcgcaagggcgacgcgatcgtcggcgcgatccgacagccgcgcgagggcgagggcggc
ggccgccagaagtacaacgcgatcgtcaagatcgactccgtcaacggccgcacgctcgag
gagaacgagaaccgcgtcgacttcgccgatctcacgccgatctccccgcaggagcgcctc
cggctcgagaccggcgccgagcagctgacgcagcgggtcgtcgacctcatcgcgccgatc
ggcaaggggcagcgcggcctgatcgtcgcaccgcccaaggccggcaagacggtcgtgctg
cagcagatcgcggatgccgtctcgaagaacacgcccgacgcgcacctcatggtcgtgctc
gtcgacgagcgtcccgaggaggtcaccgagctgcagcgctcggtcaacggcgaggtcatc
gcctcgaccttcgaccgcccggcggaggaccacaccacggtcgccgagctcgcgatcgag
cgcgccaagcgcctcgtagagctgggtcacgacgtggtcgtgctgctcgactcgctcacc
cgcctcgggcgcgcctacggcgccgcctcgccggcctcgggccggtcgttcggcggcgtg
ctcgacgccgccgcgctcgcaccggcgaagaagctcttcggcgccgcgcgcaacatcgag
aacggcggatcgctgaccatcatcgcgaccgcgctcgtcgagaccggcgcgaaggccgac
gaggtcgtcctcgaggagttcgcgggcaccgccaacatggagctgcgtctcgtgcgcgag
atcgccgacaagcgcatcttccccgcggtcgacctgaacgcgtcgtccacccaccgcgaa
gaggtgctgatgggagccgacgagctgcaggccacctggaagctgcgtcgggccctcggc
gacaccgaccgggagcaggcgctcgagagcgtgctgcagaagctgcgcgacacctcctcg
aacgccgagttcctgctgctcatgcagaagtcgcaggggctggcctga
DBGET
integrated database retrieval system
