Leucobacter sp. HNU: AB3K78_03950
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Entry
AB3K78_03950 CDS
T11231
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
leuc Leucobacter sp. HNU
Pathway
leuc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
leuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB3K78_03950 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leuc03400
]
AB3K78_03950 (mutM)
Enzymes [BR:
leuc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AB3K78_03950 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB3K78_03950 (mutM)
DNA repair and recombination proteins [BR:
leuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB3K78_03950 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XOU92987
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Position
811268..812230
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AA seq
320 aa
AA seq
DB search
MPELPEVEVVRAGLAPALSGARVVAAEVRDARALKRHVPLAGEVGVGGVGVSLDTAAASA
RAADFERRIVGAWFAAPARRGKFLWVPIIGGPPVALLAHLGMSGQMLLRAHDAPDDAHVR
VRLWIEHPEHGELRLDFADQRLFGSLAIDELVATDDGLAAGRGAAEALIPGQAAHIARDP
LDPAFDDGLFVARLRARPVAVKRQLLDQGLISGVGNIYADEALWRARLHPETAGTRIGAA
KASELLVHVREVFAKALAEGGTSFDAQYVNVNGQAGYFAHSLNAYGRTGEPCPRCGTPIT
RVAFMNRGSHFCPRCQRRRS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaggtcgaggtggtcagagccggcctcgcgcccgcgctgagcggc
gcgagggtcgtggcggccgaggtgcgtgatgcgcgcgcgctgaagcgccacgtcccgctc
gcgggcgaagtcggcgtcggcggtgtgggcgtgagcctcgacacggcggcggcgtcggct
cgcgccgcggacttcgaacgccgcatcgtcggggcctggttcgccgcgcccgcacggcgc
ggcaagttcctgtgggtaccgatcatcggcggccctccggtcgcgctgctcgcccatctc
ggcatgagcgggcagatgctgctgcgcgcccacgacgcgcccgacgatgcgcacgtgcgc
gtgcggctctggatcgagcatcccgagcacggggagctgcgcctcgacttcgcggatcag
cggctgttcggttccctcgctatcgacgagctcgtggcgaccgacgacggtctcgccgcc
ggtcgcggtgcagcggaggcgctgatcccggggcaggcggcgcacatcgcccgcgacccg
ctcgacccggcgttcgacgacggcctgttcgtcgcgcggttgcgcgcccggccggtcgcg
gtgaagcgccagctgctcgaccaggggctcatcagcggcgtcggcaacatctacgcggac
gaggcgctgtggcgtgcgcgtctgcacccggagaccgcgggcacccgcatcggagcagcg
aaggcgtctgagctgctcgtccacgtgcgcgaggtgttcgcgaaggccctcgcggagggc
ggcacgagcttcgacgcgcagtacgtcaacgtgaacgggcaggcggggtacttcgcccac
agcctgaacgcctacgggcgcacgggggagccgtgcccgcgctgcggcacgccgatcacg
cgggtcgcgttcatgaaccgcggatcccacttctgcccgaggtgccagcggcggcgttcg
tag
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