Leucobacter sp. HNU: AB3K78_13445
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Entry
AB3K78_13445 CDS
T11231
Name
(GenBank) isopeptide-forming domain-containing fimbrial protein
Organism
leuc Leucobacter sp. HNU
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
bMG10
DUF7507
DUF7619
NPCBM_assoc
CARDB
DUF7617
DUF5925
Motif
Other DBs
NCBI-ProteinID:
XOU91775
LinkDB
All DBs
Position
complement(2747185..2756493)
Genome browser
AA seq
3102 aa
AA seq
DB search
MRAWIAGGVSAALIAGVLVAAGVGAQNAEAAAPAPGFTVTPQKDLVAGEDLTLELKFSSA
GTAAGDQYNVSAGLVIPTGVTYVGASAGMTAPKVYAAGKEFTSAQDCAAIGLEAGNAGKC
RVPAGKQYLVFENITDLPVGAKQQATVTLRPNAQTFPVGTTALDTVGSAYTSNDPSRLPQ
FPGSTAKGSGTTSAPGISKTNVPVKAFRVAKSEPSPEGELLRGIHDHTTTYTLRISHTAE
GDLSNTQVTDFLPAGLEFLGTGGIDHTTNANGAQGAVEYPGAPRLTATPAPAGGAGAAGA
ASSVETIKADQALADQYGLVAGKVYTKVTWNLGTLLGLGDSRDTTAGVTQNYASTPGTSG
VFEIRYRAGIPLFENTLDFGATTPTAASGGQAANLDNNRGASTRHGISGDPYSAQTLRNV
AAVSGSYAGKKTESSAAHSVDAVDVRLLKSVSTQPNPDPANASDWSRNASFTQGQIASYR
LNIATSEYVGATQGGAPDRLVDDMADGVCPAFPAGTKITGGGSTPKLTQGSAEKPGAPMS
ASDWNSMLRAHGVSSDCSWPSTHAPASDLKLTGATLTSLSYDPSNGHFSIELALDPADAL
AAPNREHNVVYTVMQSASYTEADGQSGATSSGDRVTNNAKVTLTTEARPELDGIVSKEGA
KADGREHAADDSSATLEAALSGMQKRVLPRAAAGQTTAANVASATGWVDSAKEPFSAGDQ
VWYKISVTPPAGADVRNAKLTDFLPEGVSFDQTKNGDAYRDIVVVPSASSATLGVCTVNS
RDDLAQQFVGQPTVGADGRSLTWNLGKTGCLDRSSDRFFPRGVKLDVYVKVTVSGLSNFG
DVDLPQNLAKYQQENVDGEIFFLRDGADITVDGGTSLLKGVRSLKTTAGTTQPGAAFGSN
IDGLEVAQGVEATYRIDLAAPRNDTSDYRVLDALPAGVRKADLKGIDPSTGAVGSATAAR
WNGSTETAANGSVTAKAFDPGDPGYADLHLTSAYADRTVIVFSFAGTVPGATPPAKSGLT
LGYTLVVPSGVPGGGPAAQLTQSYENTAAVSEYRFSTNDGDSVTVVPQKLDANGEPTGGQ
LLADRPVADGEFGVDDSKTHDTSEVHLPGTTPAKRLVSTEVGPSAPAGTGNTVGLNDIDA
ANGQTQIVQGEYATFEYRVSVPAHTTVRDAKLADNGFFTQGGTRVPYEFVAGSAAFSGPN
GMTEGGLESAGFTLLRSASGGDAAGTLRFPASYTNSTDQGQEFTARITVWVKDRDASHPG
YSPDLANGATLQNTAAFSYANPVDPAKRVTTSANANATYIEPGLRVVKAASPGTDVQIGK
PVQYTITVSNPSGRAKSYENTVVDQVPAGLIVDLDSLTLNGAPLARSAVDAEAGVSTGAG
GKITWKPADVPALQAIPATVALGYTAMIDPSTGGGQSYSNTATATGYTLPKTVGGADTSD
RRGDRTTSSTAKITATTAAIAKGVRIGDSGAFAKTAQAPIGETASYQVKVTLHPNINYYN
AQIRDQLPAGVQLVGDPTVSADPAGSGIDGGWNWTVNGSNRVTGTYTGADGDIASAPDPR
TLTVTYRVLLKNTVPAGVNTLPNTAGFSWTTAHDDASQRIELTDNATVNVLNPQLGITKR
VNGASAASVDPGDTFTYTVEVRNTGTSPAYNARVRDTVPQGVVVDPSSLTASGGVLTGAG
ANGGGTIDWTVAGPLSNVAPNNTQTFTYTAKLASSDALKQANLVNEVAVTHYESFANGGR
STDPTNVKANATVTPRFPNVVLQKSTSNGSEAFVGDGFGWTLQAKNTGQGAAQTVRLTDT
LPKNWEFDPSVRPQISIGGGAFADLDAPAIGTKDGKQTLTWNLGSAASAPALLPGVGSGA
TDQQRTVRITFSAKPQNGATTDAGAGLSIAHTNTLAGQTTDATGRTANGDGGYTGPDATA
DAHIARVDLKLVKEAIGGDKRNQWTAGAVSGSGYTQPQWRITVTNQGPDAASGQFSVVDQ
TTLPDGVTTGAFTARYYANAADKTGTPLTLSGAGTAKDPFVVGDRGTRLAADGSDRIVLL
ADVTIDAAATGTAKNTASVTGRSFERQGDIDKDNSSTAQRPITTEADLAIDKVLNTAEPA
AGRPISWGIKVSNRGPSVSASTAAKRITVTDTIPAGISDVRDPSAALTSWTVTASNGWPA
KAGDTITWTFTGPQLPVGPAQELTLDGVIDSSWTGGKIVNTAVVHPGATTDPVPDNNTDD
VTTAPGDGTMLGISKTRVVNVGGVWKDAAENGGTLPDITAGGTVSYRITVANLGPADARA
VRVVDTAPSVLSYREHANVSGTWTRTAGANASTDQFSLGGTIAKGASRAFVATYDIDPGL
VPGSTVRNWAQAFAENSGNEPKDDDQNGNSDRQADLSITKQALDLDGNPTTKVTAGTELR
YRITVKNNGPSVSGAPIAVTDEMPAGMSYVSSRSTVDGISVNTAPKVSASKRSVVWTMLS
GAETLQRDGEMTFDVVAAISPDVPAQRLVNGTDVVGPDDTDPTNNHSEATVEVVTEADMT
IAKDVEAGPWVAGTDVTYTLTVENRGPSVADAFVEDVLPEGLTPVSISGAGWTCDNAAES
CKRAAHPVGTSTLTVVAHIGANVPTGTELTNTAYLSWTDSRSTAPHQVQDDAKIAVTTSA
DLSLEKTAIDADGKPTDRAVAGSTVRYRMVATNHGPSDAIAPITVTDTLPAGSRFVSLDG
ASATDWTATAEDPAADGTQRVTFTRIPDGTGLANGAAAPAILFTVQLDAGIADGAKLTNT
ATAKSGTPDPDESNNTDTAEVTVDRRVDVAVTKSHDAGQVRIGSPLEFGIDVVNHGPSIA
TGVSVTDRVPAGLTVTSAVGDLSGDRWTITEVTALPDGGTLVVAALSGELAPGERAPRLT
VGTEVQASAYAEVTNTATVTSTEEDVDRDNNRSDDPVQVPALAKLTVTKSVQGEFQVGDN
AHYRITVRNDGPTEDPGPITVTDRLPNGLTYVSSAVAAQTGGSRPVSAASVQGSRVEWTL
LKGLAKGEQVTIDLVVRVGQAAYPKVANTAVVSTPTDLTPDSELTSTVETKVQPIDPLAV
TGGAATGYAALIAALLLLVGGAVTAVRRRRDGEPVANGTAAE
NT seq
9309 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgtggatcgcgggaggggtgtcggcggcgctgatcgccggcgtgctcgtcgcg
gccggcgtcggcgcgcagaacgccgaggcggccgctccggcgcccggcttcaccgtcacg
ccgcagaaggacctggtggcgggcgaggacctgacgctcgagctgaagttctcgagcgct
ggcacggccgcgggcgaccagtacaacgtgagcgccgggctcgtgatcccgacgggcgtg
acgtacgtcggcgcttcggcgggcatgaccgcgccgaaggtctatgccgcgggcaaggag
ttcacctccgcgcaggactgcgcggcgatcgggctcgaagcgggcaacgccggcaagtgc
cgcgtccccgcgggcaagcagtacctggtcttcgagaacatcaccgacctccccgtcggc
gcgaagcagcaggcgaccgtgacgctccgccccaacgcgcagaccttccccgtcggcacc
accgccctcgacaccgtcggctccgcctacacgagcaacgatcccagccgcctgccgcag
ttccccggctcgacggcgaagggctccggcaccacctccgcccccggcatctcgaagacg
aacgtgcccgtcaaggcgttccgcgtcgcgaagagcgagcccagccccgagggcgagctg
ctgcgcgggatccacgaccacaccacgacctacaccctgcggatctcgcacaccgccgag
ggcgatctgtcgaacacgcaggtgaccgacttcctgcccgcgggcctcgagttcctcggc
acgggcgggatcgaccacaccaccaacgcgaacggtgcccagggcgccgtcgagtacccc
ggcgctccccggctcaccgcgaccccggctcccgccggcggcgcgggcgccgcgggcgcc
gcttcgtcggtcgagaccatcaaggccgaccaggcgctcgccgatcagtacgggctcgtg
gccggcaaggtctacacgaaggtgacctggaacctcggcaccctcctcgggctcggcgac
tcgcgcgacaccacggccggcgtcacgcagaactacgcgtcgacgcccggcacctcgggc
gtcttcgagatccgctaccgcgcggggatcccgctcttcgagaacaccctcgacttcggg
gccaccaccccgacggccgcgagcggcggccaggcggcgaacctcgacaacaaccgcggc
gcctcgacgcgccacggcatctcgggcgacccctactcggcccagaccctgcgcaacgtc
gccgcggtctcgggcagctatgcgggcaagaagaccgagagcagcgctgcgcactccgtc
gacgcggtcgacgtgcgcctgctgaagagcgtcagcacccagccgaaccccgatcccgcg
aacgcctccgactggtcgcgcaacgcgtccttcacccaggggcagatcgcgagctaccgc
ctgaacatcgcgacgagcgagtacgtcggcgcgacgcagggcggagcccccgatcgactc
gtcgacgacatggccgacggcgtctgcccggcgttccccgctggcacgaagatcacgggc
ggcgggtccactccgaagctcacccagggcagcgccgagaagcccggcgccccgatgagc
gcgagcgactggaacagcatgctccgggcgcacggcgtctcgtccgactgctcctggccg
tcgacgcacgcccccgcgtccgacctgaagctcaccggagcgaccctcacctcgctctcc
tacgacccgagcaacggccatttctcgatcgagctcgcgctcgatccggccgacgcgctc
gcggctccgaaccgcgagcacaacgtggtctacacggtcatgcagagcgccagctacacc
gaggccgacggtcagtcgggcgcgaccagctccggcgaccgggtcacgaacaacgcgaag
gtcacgctgaccaccgaggcgcgtcccgaactcgacggcatcgtctcgaaggagggcgcg
aaggccgatggccgcgagcacgccgccgacgattcctcggcgaccctggaggccgcgctg
agcggcatgcagaagcgggtgctgccccgcgccgccgccgggcagacgaccgccgcgaac
gtggcgagcgcgaccggctgggtggactccgcgaaggagcccttctcggcgggcgaccag
gtctggtacaagatcagcgtcaccccgccggccggcgccgacgtgcgtaacgcgaagctc
accgacttcctgccggagggcgtcagcttcgatcagacgaagaacggggacgcctaccgc
gacatcgtcgtggtgccctcggcgagctcggcgacgctcggcgtctgcacggtgaacagc
cgcgacgacctggcccagcagttcgtgggccagccgacggtcggtgccgacggccgctcg
ctgacctggaacctcggcaagaccggttgcctcgaccggtcgagcgaccgcttcttcccc
cgcggcgtgaagctcgacgtctacgtcaaggtgaccgtctcgggcctctcgaacttcggc
gacgtcgatctgccgcagaacctcgcgaagtaccagcaggagaacgtcgacggcgagatc
ttcttcctgcgcgacggcgccgacatcaccgtcgacggcgggacgtccctcctcaagggc
gtgcgctcgctcaagacgaccgcgggcaccacccagcccggtgcggccttcggctcgaac
atcgacgggctcgaggtggcgcagggcgtcgaggcgacgtaccgcatcgacctcgccgca
ccgcgcaacgacacctccgactaccgcgtgctcgacgcgcttcccgcgggcgtgcgcaag
gccgacctcaaggggatcgacccgagcacgggcgcggtcggctcggccacggcggcgcgg
tggaacggcagcaccgagaccgcggcgaacggctcggtcacggcgaaggcgttcgatccg
ggcgatcccggctacgccgacctgcacctgacctcggcgtacgcggaccgcacggtcatc
gtgttctccttcgcggggacggtccccggtgcgaccccgccggcgaagagcggtctcacc
ctcggctacaccctcgtggtgccgagcggcgtgcccggcggcggccctgccgcgcagctg
acgcagtcctacgagaacaccgcagcggtctccgagtaccgcttctcgaccaacgacggc
gattccgtcacggtggtgccgcagaagctcgacgcgaacggcgagcccaccggcggtcag
ctgctcgcggaccgtccggtcgcggacggcgagttcggcgtcgacgacagcaagacgcac
gacacctccgaggtgcacctgcccggcaccaccccggcgaagcgcctggtctcgaccgag
gtcggaccgagcgcacccgcgggaaccgggaacaccgtcggcctgaacgacatcgacgcg
gccaacggccagacgcagatcgtgcagggcgagtacgccaccttcgagtaccgcgtctcc
gtgcccgcgcacaccaccgtgcgcgatgcgaagctcgccgacaacggcttcttcacgcag
ggcggcacccgcgtgccctacgagttcgtcgccggatcggccgcgttctcggggccgaac
ggcatgaccgagggcggtctcgagagcgccgggttcaccctgctgcgcagcgcatcggga
ggcgacgccgcaggcaccctgcggttccccgcgagctacaccaactcgaccgatcagggt
caggaattcaccgcgcggatcaccgtgtgggtgaaggatcgcgacgcctcgcacccgggg
tactcgcccgacctcgcgaacggcgcgacgctgcagaacaccgcagcgttcagctacgcg
aaccccgtcgaccccgccaagcgggtgaccaccagcgcgaacgcgaacgccacctacatc
gagcccggcctgcgggtcgtgaaggccgcgagcccgggcaccgacgtgcagatcggcaag
ccggtgcagtacacgatcaccgtgtcgaacccgtccggtcgcgcgaagagctacgagaac
accgtggtcgaccaggtccccgcgggcctgatcgtcgacctcgattcgctgacgctgaac
ggcgccccgctggcgcgcagcgcggtcgacgccgaggccggcgtatccaccggcgcgggc
ggcaagatcacctggaagccggccgacgtgccggcgctgcaggcgatccctgccaccgtg
gcgctcggctacacggccatgatcgacccgagcacgggcggcggccagagctactcgaac
accgcgacggcgacgggctacaccctgccgaagaccgtcggcggcgccgatacctcggac
cgccgcggcgaccggacgaccagcagcaccgcgaagatcacggcgaccaccgccgcgatc
gcgaagggcgtgcgcatcggcgactcgggtgccttcgcgaagaccgcgcaggcgccgatc
ggcgaaaccgcgtcgtaccaggtgaaggtgaccctgcacccgaacatcaactactacaac
gcgcagatccgcgaccagctgcccgcgggcgtccagctcgtcggcgacccgacggtgtcg
gcggatccggcgggttcgggcatcgacggcggctggaactggacggtgaacggctcgaac
cgcgtcaccggcacctacaccggtgcggacggggacatcgcgtccgcgcccgacccccgc
accctcacggtgacctaccgggtgctcctgaagaacaccgtgcccgccggcgtgaacacc
ctgccgaacacggccggcttcagctggaccacggcgcacgacgacgcgtcgcagcgcatc
gagctcaccgacaacgcgacggtgaacgtgctgaacccgcagctcggcatcaccaagcgg
gtgaacggagcgagcgcggcatcggtggatccgggcgacaccttcacctacacggtcgag
gtgcgcaacacgggcacgagccccgcctacaacgcccgggtgcgcgacacggtgccgcag
ggcgtcgtggtcgacccgtcgagcctcactgcgagcggcggcgtgctcacgggcgccggc
gcgaacgggggcggcacgatcgactggaccgtcgccggcccgctgagcaacgtcgcgccg
aacaacacgcagaccttcacctacacggcgaagctcgcgagctccgacgcgctgaagcag
gcgaacctcgtcaacgaggtcgcggtgacgcactacgagtccttcgcgaacggcggacgc
tcgaccgacccgacgaacgtgaaggcgaacgcgacggtcacgccgcggttcccgaacgtg
gtgctgcagaagagcacctcgaacggctccgaggcgttcgtgggcgacggcttcggctgg
accctgcaggcgaagaacaccggtcagggtgcggcccagaccgtgcggctgaccgacacc
ctgccgaagaactgggagttcgatccgtcggtgcgcccgcagatcagcatcggcggcggt
gcgttcgccgacctcgatgcgccggccatcggcacgaaggacgggaagcagacgctgacc
tggaacctcggttccgcggcgtccgcaccggcgctcctcccgggcgtcggctcgggtgcg
acggatcagcagcgcacagtgcgcatcaccttctcggcgaagccgcagaacggcgcgacg
accgacgcgggcgctgggctctccatcgcgcacaccaacacgctggcgggccagaccacc
gacgcgaccggcaggacggcgaacggcgacggcggctacaccggccccgacgcgacggcc
gacgcgcacatcgcgcgagtcgacctgaagctcgtcaaggaggccatcggcggcgacaag
cggaaccagtggaccgccggcgcggtctcgggttccggttacacccagccgcagtggcgg
atcaccgtgacgaaccagggtcccgacgcggcctccggccagttctcggtggtcgatcag
acgaccctgccggacggcgtgacgacgggtgcgttcaccgcgcgctactacgcgaacgcc
gccgacaagaccggcaccccgctgaccctctcgggcgcgggcaccgcgaaggatcccttc
gtggtgggtgaccgcggcacccggctcgcggccgacggcagcgaccggatcgtgctgctc
gccgacgtgacgatcgacgcggcggcgaccggtaccgcgaagaacacggcgagcgtcacc
gggcgcagcttcgagcgccagggcgacatcgacaaggacaactcgtcgaccgcccagcgc
ccgatcaccaccgaggccgatctcgcgatcgacaaggtgctgaacaccgccgagcccgcg
gccggccggccgatcagctggggcatcaaggtgtcgaaccgcggtccctcggtgtcggca
tcgaccgccgccaagcggatcaccgtgaccgatacgatccccgccgggattagcgacgtg
cgcgacccctcggccgcgctcacctcctggaccgtcacggcctcgaacggctggccggcg
aaggcgggcgacacgatcacctggacgttcaccggcccccagctgccggtcggtcccgcg
caggagctgacgctcgacggcgtgatcgactcgtcctggacgggcggcaagatcgtcaac
acggccgtcgtgcacccgggtgccacgaccgatccggtacccgacaacaacacggacgac
gtcaccacggcgcccggtgacggcacgatgctcgggatcagcaagacccgcgtcgtcaac
gtcggcggcgtctggaaggacgcggccgagaacggcgggaccctgcccgacatcacggcg
ggcggcacggtcagctaccggatcacggtcgcgaacctcggcccggcagacgcccgcgcg
gtgcgcgtggtggacaccgcgccgagcgtgctgagctaccgggagcacgcgaacgtctcg
ggcacctggacccggacggccggcgcgaacgcgtcgaccgaccagttctcgctcggcggg
acgatcgcgaagggcgcctcgcgtgccttcgtcgccacgtacgacatcgacccgggcctc
gtgcccggctcgacggtgcgcaactgggcgcaggcgttcgccgagaactcggggaacgag
ccgaaggacgacgaccagaacggcaactcggaccgccaggccgatctctcgatcacgaag
caggcgctcgacctcgacggcaacccgaccaccaaggtcaccgccggcaccgagctccgc
taccggatcacggtgaagaacaacgggccgagcgtctcgggcgcacccatcgcggtgacc
gacgagatgcccgccggcatgagctacgtctcgtcgaggagcacggtcgacggcatctcg
gtgaacacggcaccgaaggtctccgcctcgaagcgctcggtcgtgtggaccatgctcagc
ggtgccgagaccctgcagcgggacggcgagatgaccttcgacgtcgtcgcggcgatctcg
cccgacgtgcccgcccagcggctcgtcaacggcacggacgtggtcgggccggacgacacc
gatccgacgaacaaccactccgaggcgaccgtcgaggtcgtgaccgaggcggacatgacg
atcgccaaggacgtcgaggccggcccctgggtcgcgggcaccgacgtgacgtacacgctg
acggtcgagaaccgcgggccgtcggtcgccgacgcgttcgtcgaggacgtgctgcccgag
gggctcaccccggtgtcgatctcgggcgcgggctggacctgcgacaacgcggcggagtcg
tgcaagcgcgcggcccacccggtcggcacgagcacgctcacggtggtcgcgcacatcggc
gcgaacgtcccgacgggcaccgagctgaccaacacggcctacctctcctggaccgacagc
cgcagcacggcgccgcaccaggtgcaggacgacgcgaagatcgccgtcaccacgagcgcc
gacctgagcctcgagaagaccgcgatcgacgccgacggcaagccgaccgaccgcgccgtg
gccgggtcgaccgtgcggtaccggatggtcgcgaccaaccacgggccgagcgacgcgatc
gccccgatcacggtgaccgacacgctccccgcgggcagccgcttcgtctcgctcgacggc
gcctcggcgaccgactggaccgcgaccgccgaggatcccgcggccgacggcacgcagcgc
gtgaccttcacgcggatccccgacgggactggtctcgcgaacggcgccgccgcacccgcg
atcctgttcaccgtgcagctcgacgccggcatcgccgacggggcgaagctgacgaacacg
gcgacggcgaagtcggggacccccgatcccgacgagtcgaacaacaccgacaccgccgag
gtgacggtggatcgccgggtcgacgtcgcggtgaccaagtcgcacgacgcgggtcaggtg
cgcatcggctcgccgctcgagttcgggatcgacgtcgtgaaccacggtccgtcgatcgcg
accggcgtcagcgtgaccgaccgcgtgcccgcgggtctgacggtgacgagcgccgtgggc
gacctctcgggcgaccgctggacgatcaccgaggtcacggcgctgccggacggcggcacc
ctcgtggtggcggcgctgagcggcgagctggcaccgggcgaacgcgccccgaggctgacc
gtcggcaccgaggtgcaggcgagcgcctacgccgaggtcaccaacacggcgaccgtcacc
tcgaccgaggaggacgtggaccgcgacaacaaccgctcggacgatccggtgcaggtgccc
gcgctcgcgaagctcacggtgacgaagtccgtgcagggcgagttccaggtgggcgacaac
gcgcactaccggatcacggtgcgcaacgacggcccgaccgaggatcccggccccatcacg
gtgaccgatcgcctgccgaacgggctgacctacgtgtcgagcgcggtcgcggcccagacc
ggcggatcccgcccggtgtcggcggcctcggtgcagggcagccgcgtcgagtggaccctg
ctgaagggtctcgcgaagggcgagcaggtcaccatcgatctcgtcgtgcgggtcgggcag
gcggcctaccccaaggtcgcgaacactgcggtggtctcgacgccgaccgatctgacgccc
gactcggagctgacgagcacggtcgagacgaaggtgcagccgatcgatccgctcgccgtg
accggtggtgcggcgaccggttacgcggcactgatcgcggcgctcctgctcctcgtgggc
ggggccgtgaccgcggtgcgacgccgccgcgacggtgagccggtcgcgaacggaaccgct
gccgagtaa
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integrated database retrieval system
