Leisingera sp. NJS201: ETW23_04465
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Entry
ETW23_04465 CDS
T08375
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lev
Leisingera sp. NJS201
Brite
KEGG Orthology (KO) [BR:
lev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lev03016
]
ETW23_04465 (thpR)
Enzymes [BR:
lev01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ETW23_04465 (thpR)
Transfer RNA biogenesis [BR:
lev03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ETW23_04465 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Acb1
CCDC92
Talin_IBS2B
Motif
Other DBs
NCBI-ProteinID:
QBR35501
LinkDB
All DBs
Position
924830..925372
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AA seq
180 aa
AA seq
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MRSFAGLPLPDAARIALERVQEELTAGRPVPAENMHLTLAFLDDQPEQMLQALHQELAAI
RAPVLTLRIQGLETFGGRQPRVLAAAVQKTPELSRLRNQVRSACQAAGIALARERFRPHV
TLARFPRYLQPGQLEKIAGFLQAAAGFRLQTDMDCFALYQSTLAPDGARYDVLAEYPLES
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctttcgcgggcttgccgctgcctgatgcagcccggattgcgctggagcgcgtg
caagaagagctgaccgcagggcggccggtgcctgcagagaatatgcatctgacgctggca
tttctggatgatcagccggaacagatgctgcaagccctgcatcaggaactcgccgccatc
cgcgcgccggttctgaccctcagaattcaggggctggagacctttggcggcaggcagccg
cgggtgctggctgccgcggtgcaaaagacgccggagctgagccgcctgcggaaccaagtg
cgcagtgcctgtcaggcggcgggaattgctttggcgcgggaacggttccgcccgcatgtg
acgctggcccggttcccgcggtatctgcagccgggtcagctggagaagatcgccggtttc
ctgcaagcggcggcgggcttccggctgcagaccgatatggactgctttgcgctataccag
tctacgctggcccccgacggcgcgcgctatgatgtcttagcggaatacccgctggagagc
tga
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