Leisingera sp. NJS201: ETW23_23470
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Entry
ETW23_23470 CDS
T08375
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lev
Leisingera sp. NJS201
Pathway
lev00521
Streptomycin biosynthesis
lev00523
Polyketide sugar unit biosynthesis
lev00525
Acarbose and validamycin biosynthesis
lev00541
Biosynthesis of various nucleotide sugars
lev01100
Metabolic pathways
lev01110
Biosynthesis of secondary metabolites
lev01250
Biosynthesis of nucleotide sugars
Module
lev_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lev00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ETW23_23470 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ETW23_23470 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ETW23_23470 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ETW23_23470 (rfbB)
00525 Acarbose and validamycin biosynthesis
ETW23_23470 (rfbB)
Enzymes [BR:
lev01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ETW23_23470 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
adh_short_C2
NAD_binding_10
Sacchrp_dh_NADP
NmrA
FAA_hydrolase_N
Motif
Other DBs
NCBI-ProteinID:
QBR38829
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Position
unnamed4:92220..93272
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AA seq
350 aa
AA seq
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MKILVTGGAGFIGSAVVRLAVARGHQVVNLDALTYAACLANVAEAAQSPLYAFEQADIRD
RAALDRAFETHKPDAVMHLAAESHVDRSIDGPGDFVETNITGTYQMLEAARKYWTAAGKP
EAFRFHHISTDEVYGSLPADPDVMFTEDTAYDPRSPYSASKAASDHLVRAWAETYGLPVV
LTNCSNNYGPYHFPEKLIPVVILNALAGKPLPIYGDGSNVRDWLYVEDHADALLLVVQKG
ALGRSYNIGGENERSNLELVQTLCSILDQKRPRADGGSYKDQITFVTDRPGHDARYAIDP
SRIRDELGWRPSVTVEEGLERTVQWYLDNEAWWRALQDRDGVGQRLGTGK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggtaaccggcggggccggttttatcggctcggcagtggtgcggctggcg
gtggcgcgcggccatcaggtggtgaacctggatgcgctgacctatgccgcctgcctggcg
aatgtggccgaggctgcacaaagcccgctttatgcgtttgaacaggccgacatccgcgac
cgcgccgcattggaccgcgcatttgaaacccataaacccgatgcggtgatgcatctggcg
gcggaatcccacgtcgaccgctcgatcgacgggccgggcgattttgtcgagaccaatatc
accggcacctatcagatgctggaagccgccaggaaatactggaccgcggccggcaagccg
gaggctttccgcttccatcacatctcgaccgatgaggtctacgggagcctgcccgccgac
cccgatgtgatgttcaccgaagacaccgcctatgatccgcgctcgccctattccgcctcc
aaggccgccagcgaccatctggtgcgcgcctgggccgaaacctatggcttgccggtggtg
ctgaccaattgctccaacaattacggcccctatcactttccggaaaaactgatcccggtg
gtgatcctgaacgcgctggccggcaagccgctgccgatctacggcgacggctccaacgtg
cgcgactggctttatgtcgaggatcacgccgacgccctgctgctggtggtgcaaaagggc
gcgctggggcgcagctacaatatcggcggcgagaatgagcgttcgaacctggagctggta
cagacgctgtgttcgattctggatcaaaagcggccccgtgccgatggcggatcttacaaa
gatcagatcacctttgtcaccgaccgtcccggccatgacgcgcgctatgccatcgatccc
agccgcatccgcgacgaactcggctggcgcccttcggtgacggtcgaggaaggcctggag
cgcaccgtgcaatggtatctggacaatgaggcctggtggcgcgccctgcaggaccgcgac
ggcgtcggccagcggctgggcaccggcaagtga
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