KEGG   Leisingera sp. NJS201: ETW23_23820
Entry
ETW23_23820       CDS       T08375                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
lev  Leisingera sp. NJS201
Brite
KEGG Orthology (KO) [BR:lev00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lev02044]
    ETW23_23820 (tssC)
Secretion system [BR:lev02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   ETW23_23820 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QBR38893
LinkDB
Position
unnamed5:complement(8248..9744)
AA seq 498 aa
MAEEELQAEAAAGEAAFGSAEFASLLQKEFRPKSDQAKTAVESAVKTLAEQALANTALVS
DDALRSIESIVSAIDAKLTEQVNLILHNADFQQLESAWRGLHYLVNNTETDEQLKIRVMP
ITKKEMSKTLKKFKGTAWDQSPLFKKIYTEEFSQLGGEPYGSLVADYHFDHSPPDIELLG
EMSKIAAAAHAPLITGAKPTLFQMDSWSELSNPRDLTKIFQTPEYAAWRSLRDSEDAKYV
GLAMPRFLGRLPYGSKTDPVDEFAFEEDTAGATSEKYGWVNAAYGMAVNITRSFKMYGWC
SRIRGVESGGTLENLPSHTFPTTDGGVDQKCPTEIAIDDRREAELAKNGMMPLIHRKNTD
VATFMGAQSLHKPAEYDDPDASANANLGARLPYLFATCRFAHYLKCMVRDKVGSFKSRQD
MESWLQDWINNYVDFNADISSENEKARKPLAAAEVVVEEVEGNPGYYTSKFFLRPHYQLE
GLSVSLRLVSKLPSEKGG
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggctgaagaagaactccaggcggaagccgctgctggtgaagccgcctttggctctgcc
gaatttgcaagcctgctgcaaaaggaattccgccccaagtcggaccaggccaagacggcc
gttgaaagcgcggtcaaaaccctggccgagcaggcgctggcaaacaccgcgctggtgtcc
gatgacgcgttgcgctcgatcgagagcattgtgtcggcaattgacgcgaagctgaccgag
caggtcaatctgatcctgcacaacgcggacttccagcagctggaaagcgcctggcgcggg
ctgcactatctggtcaacaacaccgagaccgatgaacagctgaaaatccgggtgatgccg
atcaccaaaaaggaaatgtcgaagaccctgaagaaattcaagggcacggcatgggaccag
tcgccgctgttcaagaaaatctacaccgaggaattcagccagctgggcggtgagccttac
ggctctctcgtggcggattaccatttcgaccactcgccgccggacatcgaactgctgggt
gaaatgtccaagatcgccgcggccgcccatgcgccgctgatcaccggcgccaagccgact
ctgttccagatggacagctggtcggaactgtcgaacccgcgcgatctgaccaagattttc
cagactccggaatatgccgcctggcgctccttgcgcgacagcgaggatgcgaaatacgtc
ggtctggccatgccgcggttcctgggccgtctgccctatggctcgaaaaccgatccggtg
gacgagtttgcctttgaggaagacaccgcaggcgccaccagcgagaaatacggctgggtc
aacgcggcctatggcatggcggtgaacatcacccgctcgttcaagatgtacggctggtgc
tcgcggatccgcggcgtggaaagcggcggcacgctggaaaacctgccctcgcatactttc
ccgaccaccgatggcggcgtcgatcagaaatgcccgaccgagattgccattgacgaccgg
cgcgaggcggaactggcgaagaacggcatgatgccgcttattcaccgtaaaaacaccgat
gtggccacctttatgggcgcgcaatcactgcacaaaccggcggaatatgacgacccggat
gcctctgccaacgccaatctgggcgcgcggctgccatatctgttcgccacatgccggttt
gcgcactatctgaagtgcatggtgcgggacaaagtcggctcgttcaaaagccgtcaggac
atggaatcctggctgcaggactggatcaacaactatgttgatttcaacgcggatatctct
tcggagaacgagaaggcgcgcaaacctctggccgcagccgaagtggttgtggaagaggtc
gagggcaacccggggtattacacctcaaaattcttcctgcgcccgcattaccagcttgag
gggctttctgtctcgctgcggctggtatccaaactgccctcggaaaagggaggctga

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