KEGG   Lelliottia sp. WB101: DAI21_08565
Entry
DAI21_08565       CDS       T05398                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
lew  Lelliottia sp. WB101
Pathway
lew03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lew00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DAI21_08565 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lew02044]
    DAI21_08565 (icmF)
Secretion system [BR:lew02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DAI21_08565 (icmF)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical nSTAND1 AAA_22 AAA_16
Other DBs
NCBI-ProteinID: AVY97713
LinkDB
Position
1794056..1797520
AA seq 1154 aa
MPRFKVSAFWLLVLAWIFLLVWIWWKGPTWTLYEEHWLQPLTRRWLATAVWGFIALAWLT
IRVMKRLQQLERQQKQQREETQDPISVELNAQQRYLDRWLLRLQRHLDSRRYLWQLPWYM
VIGPAGSGKTALLREGFASDVIYTPETARGAEQRLYLTPHVGKQAVIFDVSGSLCEQPEA
DVLHRRLWEHMLDWLVQKRARQPLNGLILTLDFLDLLTADKRRREYLLQMLRSRLQDVRQ
HLHCQLPVYVVLTRLDLLHGFAALFQSLDKQGRDSILGVTFTRGAHESDDWRAELDNFWQ
VWGDLINHALPDLMLAQSHDRSSLFSFARQMQGSLAPLVALLDGLLDGENMDVMLRGVYL
TSSLQRGQMDDIFMQSAARQYGLGSSPLSAWPLVDTAPYFTRNLFPQVLLAEPNLAGESH
AWLINARRRLTIFSVAGGAGVILLITGWHHYYNANYASGIQVLKQAKAFMAVQPPQGMDE
FGNLQLPLLNPVRDATLAYGDWGDRSRLADLGLYQGRRIGPYVEQTYLQLLEQRYLPSLL
NGLVKEMNSAPPESEEKLAILRVIRMLEDKSGRSDEVVKQYMAKRWSEKFHGQRDIQVQL
MSHLDYALAHTDWHAEREKGDSDAISRWAPYGSPVAGAQKELSKLPVYQRVYQSLKTRAL
GVLPADLNLRDQVGPSFERVFTSADDNKLIVPQFLTRYGLQSYFVKQRDELVELTAMDSW
VLNLTRSVKYSQADRTEIQRQLTEQYLSDYTATWRVGMDNLNVRDYESIAQLTGALEQVI
SGDQPLQRALTALRDNTQPAVLSEKLSDKEREEALAEPDYRLLTRLGHEFAPENSALAVQ
KEKESTMQAVYQQLTELHRYLLAIQNAPVPGKSALKAVQLRLDQNSSDPIFATRQMAKTL
PAPLNRWVGKLADQAWHVVMVEAVHYMEVDWRDTVVKPFNEQLANNYPFNPGAQQDASLD
AFERFFKPDGVLDAFYQQNLRLFMENDLSLEDGDSAVIIREDIRQQLEAAQKIRDIFFSK
QNGLGAQFAVETVSLSGNKRRSVLNLDGQLVDYSQGRNSTAHLVWPNNMREGNESKLTLI
GTSGNSPRSISFSGPWAQFRLFGAGQLTGVQDGTFSIRFTVDGGAMVYRVHTDTEDNPFA
GGLFSQFALPDTLY
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgcctcgctttaaggtttccgccttttggttactggtgctggcgtggatttttctactg
gtatggatctggtggaaaggcccgacatggacactctacgaagagcactggctgcagccg
ctgacccgccgttggctggcgacagccgtatggggatttatcgcgctggcatggctcact
ataagggtgatgaaacgtttgcaacagcttgagcgacagcagaaacagcagcgtgaggaa
actcaggatccgataagcgtggagctgaatgctcagcagcgctacctcgatcgctggcta
ctgcgcctgcaacgccatctcgacagtcgtcgttatctctggcaactgccgtggtatatg
gttatcggtcctgcaggaagtggcaaaaccgcgctgcttcgcgaaggctttgcgtcggat
gttatttatactccggaaaccgcacgcggcgccgaacagcggttgtatctcacgcctcac
gtcggaaaacaggcggtcatttttgacgtcagcggttcactctgtgagcagcctgaggcg
gatgtgctgcaccgccgtttatgggagcatatgcttgactggctggttcagaaacgcgcc
cgccagcccctcaatggcctcattctgactctcgattttctcgatctcctgacggctgat
aagcgccgccgtgaatacctcttgcagatgttgcgcagtcgtttacaggatgtgcgccag
caccttcattgccagctgccggtgtatgttgtcctcacccggctcgatttgttacatggt
tttgcagcgctatttcagtcgctggataaacagggccgcgacagcatccttggggtgacg
tttacgcgtggcgcccatgagagtgacgattggcgtgccgagctggacaacttctggcag
gtatggggcgacctgattaatcatgctctgccagatctgatgctggcgcagagccatgac
cgcagctcccttttcagttttgctcgtcagatgcaagggagcctggctcctcttgttgca
ctgcttgacggcttgctggacggcgaaaacatggacgttatgctgcgcggtgtctatctc
acgtcgtcactgcaacgtggccagatggatgacatttttatgcagtccgcagcccgtcaa
tacgggcttgggagtagcccactcagcgcctggccgctggtggatacagccccctatttt
acccgtaatttgttcccacaggtgctgctggcggagccaaacctggcgggcgaaagccat
gcctggcttatcaacgctcgccgtcgcctgacgattttctctgtcgcaggcggcgcggga
gtgatactgctgataacaggctggcatcactattacaatgccaactacgcctccggcatt
caggtgctgaagcaggcgaaagcctttatggccgtgcagcctccgcaggggatggatgag
tttggcaatctgcaattgcctctgcttaatcctgtacgcgatgccactttggcctacggc
gactggggcgatcgcagtcgtctggcggatctgggtctgtatcagggcagacgtattggt
ccctatgtggagcagacctatctgcaactgcttgagcagcgctatctgccttctttgttg
aacggtctggtcaaagagatgaattcggcgccacccgaaagcgaggagaaactcgctatt
ctgcgtgtgatccgcatgctggaagacaaaagtgggcgcagcgatgaagtggtgaagcaa
tatatggcgaagcgctggagtgaaaaattccacggtcagcgcgatatccaggtgcagcta
atgtcccatctcgactatgcgctggcgcataccgactggcatgcagagcgggagaagggc
gatagcgatgccatcagtcgatgggcaccctatggcagtcctgttgctggtgcacaaaaa
gaactcagcaaacttccggtataccagcgcgtttatcaaagcctgaaaacgcgtgcgctg
ggggtgttacctgcagatttgaacctgcgcgatcaggtagggccaagctttgagcgggtg
tttacctcggctgacgataacaagctgatcgttccgcagttcctcacccgctatggcttg
cagagttactttgtgaaacagcgcgacgaactggtggaactcacagcgatggatagctgg
gttttgaacctcacccgcagcgttaagtacagccaggctgacaggacggaaatccagcgt
cagcttacggagcaatacctcagcgattacaccgccacctggcgggttggaatggataac
cttaatgtccgcgattatgaatctatcgcgcagctgacgggtgcgctggagcaggtgatc
agtggcgatcagcccctccagcgggcgttgacagctctgcgcgacaacacccaacccgca
gtcctctcagaaaagctctccgataaagagcgggaagaggcgctggctgagccggattac
cgtctgctgacccgtctcgggcatgaattcgcgccggaaaacagcgcgctggcggtgcag
aaagagaaagaaagcacgatgcaggcggtctatcagcaattaacggaactgcatcgttat
ttgctggcaatacagaatgcaccggtccccggaaaatcggcgctcaaagcggtacagctt
cggctggatcagaacagcagcgacccgatttttgccacccgtcagatggctaaaacgctg
cccgcgccgcttaaccgctgggtgggtaaactcgctgaccaggcctggcatgtggtgatg
gtggaagccgttcactacatggaagtggactggcgcgacaccgtagtgaaacccttcaac
gaacagctggcgaacaactatccgttcaatccgggtgcgcagcaggacgcctcactggat
gcctttgaacgtttctttaaaccggatggcgtgctggacgcgttttatcagcagaatctg
cgcctgtttatggaaaacgacctcagcctggaagacggtgacagtgcggtgatcatccga
gaggatatccgccagcaactggaagccgcacaaaaaattcgcgatattttcttcagcaaa
cagaacggcttaggtgcgcaatttgcggtagagaccgtgtctttatccggcaacaaacgc
cgcagcgtgctgaatctcgacggccagttagtggattacagccaggggcgcaattccacc
gcgcatctggtgtggccgaacaatatgcgtgaaggcaatgaaagcaaactgacgcttatc
ggcaccagcggcaattcccctcgcagcatcagcttcagcggtccgtgggctcagttccgc
ctgttcggggcggggcagctaacgggtgtgcaggacggtacgttcagcatccgctttacc
gtagacggcggggcgatggtttatcgcgtacacacagatacggaggacaatccattcgca
ggcgggttgttcagtcagttcgcgttaccggacacgctctactaa

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