Lelliottia sp. WB101: DAI21_09500
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Entry
DAI21_09500 CDS
T05398
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lew
Lelliottia sp. WB101
Brite
KEGG Orthology (KO) [BR:
lew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lew03016
]
DAI21_09500
Enzymes [BR:
lew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DAI21_09500
Transfer RNA biogenesis [BR:
lew03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DAI21_09500
Prokaryotic type
DAI21_09500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AVY97879
UniProt:
A0AAD0IIU0
LinkDB
All DBs
Position
1987823..1988872
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AA seq
349 aa
AA seq
DB search
MIDFANLTYLHGKPQGNGLLKASPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSKFELEGCKVLEYARHKRK
LRLGALQGNTFTLVLREVTDRDDVEKRLTAINEQGVPNYFGTQRFGIGGSNLQGALRWAQ
SNAPVRDRNKRSFWLSAARSALFNQIVSERLKKTDANQVVVGDALQLAGRGSWFVATSDE
MADLQARVENKTLLITAALPGSGEWGTQGDALVAEQAAVAEATELQSLLVREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactttgctaacctgacgtatctgcacggcaaaccacagggaaatggcctgctg
aaagccagcccagaagatttcgtggtcgtggaagatctcggctttgagccggacggcgaa
ggcgagcatattctggtgcgtattctgaaaaacggctgcaacacccgttttgtggccgat
gcgctggcaaaattcctcaagattcatgcccgtgaagtgagctttgcggggcaaaaagac
aaacatgcggtcacggaacagtggctgtgcgcgcgcgtgccgggcaatgcgatgcctgat
ttaagcaaatttgagcttgaaggctgtaaagtgctggagtacgcccgccacaagcgcaag
ctgcgcttgggggcgcttcagggcaatacgtttactcttgtgctgcgtgaagtcacagac
cgtgatgacgtcgaaaaacgtctgacggccattaacgagcagggcgtgccgaactatttc
ggtacccagcgtttcgggattggcggcagcaatttgcagggcgcgctgcgctgggcgcag
agcaatgccccggttcgcgacaggaataaacgcagtttttggttgtctgcagcccgcagt
gcgttgtttaatcagattgtgagcgaacgactgaaaaaaacggacgcgaatcaagttgtt
gtcggcgatgcgctacaattagcgggacgcggcagttggttcgtcgccacaagcgatgaa
atggccgatctgcaggcacgcgtcgagaataaaacgctgttgattaccgccgcgctgccc
ggctcgggagagtggggaacgcagggcgacgcgctggtcgcggagcaggcggcggttgca
gaggcgacagaattacaatcattgctggtgcgggagaaagttgaagcggcacgccgcgcg
atgctgctctatccgcagcagctaagctggaactggtgggatgacgtaaccgtagagtta
cgtttctggctgccggcagggagctttgccaccagtgttgtcagggaactaatcaatacg
tcgggtgactatgcgaatattgctgagtaa
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