Lelliottia sp. WB101: DAI21_10750
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Entry
DAI21_10750 CDS
T05398
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
lew
Lelliottia sp. WB101
Brite
KEGG Orthology (KO) [BR:
lew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lew03009
]
DAI21_10750
Enzymes [BR:
lew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DAI21_10750
Ribosome biogenesis [BR:
lew03009
]
Prokaryotic type
rRNA helicases
DAI21_10750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
DUF561
AAA_30
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AVY98103
UniProt:
A0AAD0IJ68
LinkDB
All DBs
Position
complement(2227587..2228918)
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AA seq
443 aa
AA seq
DB search
MTVTTFSELELDECLLEALQNKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PVLQHLIDFPRKKSGPPRILILTPTRELAVQVAEHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLMQYIKEENFDCRAVETLILDEADRMLELGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLNEPAEVSATPSTRERKKIHQWYYRADNLEHKVELLK
HLLKQDDTTRTIVFVRKRERVHELANMLRSAGIDNCYLEGDMPQAKRTEGIKRLTEGRVN
VLVATDVAARGIDIPDVSHVINFDMPRTGDTYLHRIGRTGRAGRKGIAISLVEAHDYMLL
LKVGRYIEEPLKARVIDELRPTTRPPSEKMTGKPSKKVLAKREEKKKEQAKEKPRVKNRH
RDAKNIGKRRKPSGTPPTSQNEE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgagtgcctgctggaagctctccag
aataaaggcttcacacgcccaactgccatccaggcggctgctattccgcctgcgttagaa
ggccgtgatgtactcggttctgcgccgacaggcaccggtaaaacggcggcatacctgctg
cccgtcttgcagcatctgatcgatttccctcgcaagaaatctggcccaccgcgcattctt
attctgaccccaacacgtgaactggccgtgcaggtggcagaacatgcgcgtgaactggcc
gcgaatacgcatctggatatcgctaccatcaccggcggtgttgcctatatgaaccacgcc
gaagtgttcagtgagaaccaggatatcgtggtggcgacaaccggacgcctgatgcagtac
atcaaagaagagaactttgactgccgtgcggtggaaacgctgatccttgatgaagctgac
cgcatgctggaactcggttttgcgcaggacatcgaacacattgcgggcgaaacgcgctgg
cgcaaacagacgatgctgttctccgccaccctggaaggtgatgcaattaaagacttcgct
gagcgtctgctcaacgaaccagcggaagtgtctgcgacgccatccacgcgcgagcgcaaa
aagattcaccagtggtattaccgtgccgataaccttgagcacaaagtcgagttgctgaaa
catctgctgaaacaagatgataccacccgtaccatcgtgtttgtgcgtaagcgcgagcgt
gtgcatgagctggcgaacatgctgcgttcagccggtatcgataactgctatcttgaaggc
gatatgccgcaggcgaagcgtaccgaggggattaagcgtctgactgaaggtcgcgtcaat
gtgctggttgccaccgacgtcgcagcgcgcggtatcgatattcctgatgtcagccatgtc
attaacttcgacatgccgcgtaccggtgacacctacctgcaccgtatcggtcgtaccggc
cgtgcgggtcgtaaagggatcgctatctcgctggtagaagcacacgactacatgctgctg
ctgaaagttgggcgttatatcgaagagccattgaaagctcgcgtcattgacgaactgcgt
ccgaccacgcgcccaccgagcgaaaagatgacgggcaaaccgtccaagaaagtgctcgcg
aaacgcgaagagaagaaaaaagagcaggcgaaagagaagccgcgcgtgaagaaccgccat
cgcgatgccaaaaacattggtaagcgccgtaagccaagcggtacgccgccaacgtcgcag
aacgaagagtaa
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