Lelliottia sp. WB101: DAI21_12290
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Entry
DAI21_12290 CDS
T05398
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lew
Lelliottia sp. WB101
Pathway
lew03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DAI21_12290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lew03400
]
DAI21_12290
Enzymes [BR:
lew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
DAI21_12290
DNA repair and recombination proteins [BR:
lew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DAI21_12290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Flagellin_IN
Motif
Other DBs
NCBI-ProteinID:
AVY98375
LinkDB
All DBs
Position
complement(2561547..2562404)
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AA seq
285 aa
AA seq
DB search
MKYVGAHVSAAGGLANAAIRAAEIEATAFALFTKNQRQWRAAPLTTEVIDDFKAACEKYH
FGPGQILPHDSYLINLGHPVQEALDKSREAFLDELQRCEQLGLTLLNFHPGSHLMQIEEE
ACLARIAESINIALAQTTGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDT
CHAFAAGYDLRTLEECEKTFAEFERIVGFKYLRGMHLNDAKSAFGSRVDRHHSLGEGNIG
HDAFRFIMQDARFDGIPMVLETVNPDIWAEEIAWLKAQQTAEQAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgttggagcgcacgtgagcgcagcaggtggtcttgcgaatgccgccattcgc
gccgccgaaatcgaggcgacagctttcgccctgttcaccaaaaatcagcgccagtggcgc
gctgcgccgctcaccactgaagtgattgatgatttcaaagccgcctgcgagaagtatcac
ttcgggccgggccagatccttccgcatgacagctacctcattaacctgggccatccggtt
caggaggcgctggataaatcgcgcgaggcgtttctggatgaacttcagcgctgcgaacag
cttggcctgacgctgctgaacttccatccgggtagccatctgatgcagatagaggaagag
gcgtgtctggcacggatcgccgaatccatcaatattgcgctggcgcagaccaccggcgtc
accgcggtaatcgaaaacaccgcaggtcagggcagcaatctgggattcaagtttgagcat
ctggcggcgattatcgacggtgtggaagataaatcccgcgtcggcgtctgcattgatacc
tgccacgcctttgccgccgggtatgacctgcgcacccttgaagagtgcgagaaaaccttc
gcggagtttgaacgtattgtcggctttaagtatctgcgcggcatgcatttgaatgatgcc
aaaagcgcgttcggcagccgcgtggaccgccatcacagtctgggtgagggcaatatcggc
cacgacgcgttccgctttatcatgcaggacgcccgctttgacggcatcccaatggtgctg
gaaacggtgaatccggatatctgggcggaagagatcgcctggctgaaagcccagcaaacg
gctgaacaagccgcataa
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