Lelliottia sp. WB101: DAI21_14750
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Entry
DAI21_14750 CDS
T05398
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lew
Lelliottia sp. WB101
Brite
KEGG Orthology (KO) [BR:
lew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lew03032
]
DAI21_14750 (topA)
03400 DNA repair and recombination proteins [BR:
lew03400
]
DAI21_14750 (topA)
Enzymes [BR:
lew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DAI21_14750 (topA)
DNA replication proteins [BR:
lew03032
]
Prokaryotic type
DNA Topoisomerases
DAI21_14750 (topA)
DNA repair and recombination proteins [BR:
lew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DAI21_14750 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
CK_II_beta
Motif
Other DBs
NCBI-ProteinID:
AVY98812
LinkDB
All DBs
Position
3057877..3060474
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSADSTSTKGAKKPK
KDERSALVNRMGVDPWHEWEAQYEVLPGKEKVVNELKQLAEKADHIYLATDLDREGEAIA
WHLREIIGGDESRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANVATPGGDALPLQVTH
EKDKPFRPVNRDQTMAAVALLEKARYQVLDREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVSMVRDYISDNFGKKYLPESAIQYASKEN
SQEAHEAIRPSDVAVESEALKDMETDAQKLYQLIWRQFVACQMNPAKYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDELTLTELIPTQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRAENRRFYAEKMGEIVTDRLEDNFRELMNY
DFTAQMEDRLDQVANHQAEWKKVLDSFFGDFTQQLEKAEKAPEEGGMQPNQMVLTSIECP
TCSRQMGIRTATTGVFLGCSGYALTPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaataagtat
ctgggtaatgactatgtggttaaatccagtgttggtcacatccgcgatttgccgaccagt
ggctcagccagtaaaaagagcgcagactctacctccaccaaaggggctaagaagcctaaa
aaggatgaacgtagcgcgctcgtcaaccgtatgggtgtcgatccctggcacgagtgggaa
gcacagtacgaagtgctgcccggcaaagagaaagtcgttaatgagctgaagcagctcgcc
gaaaaagctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaaatcattggtggtgatgaatcacgatacagccgtgtcgtgtttaac
gagattacaaagaatgcgattcgtcaggcgtttgaaaagccgggcgaactgaatatcgat
cgtgtaaacgctcaacaggcgcgtcgttttatggaccgcgtggtgggctacatggtttcg
ccactgctgtggaagaaaatcgcgcgtggcctttccgctggacgtgttcagtccgtagcg
gtgcgtctggtcgtcgaacgtgagcgcgaaatcaaagcgtttgtgccggaagagttctgg
gaaatcgacgcgaatgtcgcaacgccgggcggcgatgcactgccgctgcaggtgacccac
gaaaaagacaaaccgttccgtccggttaatcgcgatcaaaccatggcggcggttgcgctg
ctggaaaaagcccgttatcaggtgctggatcgtgaagacaaaccgacgagcagcaaaccg
ggcgcgcctttcattacctccacgcttcagcaggcggccagtacgcgtctgggctttggc
gtgaagaaaaccatgatgatggcgcagcgcttgtatgaagcgggttacatcacttatatg
cgtaccgactcaacgaacctgagccaggacgccgtaagcatggtgcgcgactacattagc
gataatttcggcaagaaatacctgccggaaagcgctatccagtatgcgagcaaagaaaac
tctcaggaagcgcacgaagcgatccgtccgtccgatgtggctgtcgaatccgaagccctg
aaagacatggaaaccgatgcccagaaactgtatcagctgatctggcgtcagttcgtggcc
tgccagatgaacccggcgaaatacgactctacaacactgaccgtaggcgcaggcgatttc
cgtctgaaagcgcgcggccgtatcctgcgctttgacggctggacgaaagtcatgccagca
ctgcgtaaaggtgatgaagatcgtacgctgccagccgtgaacaagggcgatgagcttacg
ctgacggaactgatcccgacccagcactttaccaagccgcctgcgcgtttcagcgaagcg
tcactggtgaaagagctggaaaaacgcggtatcggccgcccgtccacctatgcgtcgatc
atctcgaccattcaggatcgtggctacgttcgcgctgagaaccgtcgtttctacgctgaa
aaaatgggtgagatcgtgacagatcgtctggaagataacttccgcgagctgatgaactac
gatttcaccgcgcagatggaagaccgcctcgaccaggtggctaatcatcaggctgaatgg
aagaaggtgctcgacagcttcttcggcgatttcacccaacaactggagaaagctgaaaaa
gcgccagaagagggcggaatgcagccgaaccagatggtcctgaccagcatcgaatgcccg
acctgtagccgccaaatgggtatccgtaccgcgactaccggcgtgttcctcggctgttct
ggctatgccttaacgccgaaagagcgctgcaaaactaccatcaacctggtgcctgagaac
gaagttctcaacgtgctggaaggtgacgatgcagaaaccaacgcgttgcgtgcgaaacgc
cgttgccagaaatgcggcacggcgatggacagctacctgatcgatccgaagcgtaaattg
catgtctgtggtaacaacccgacctgcgatggctacgaaatcgaagagggcgagttccgc
atcaaaggctatgacggcccgattgtggagtgcgagaagtgtggttctgaaatgcacctg
aaaatggggcgtttcggtaagtacatggcgtgtaccaacgacgaatgtaagaacacgcgt
aagattttgcgtaacggcgaagtggctcctcctaaggaagatccggttccgttgccagaa
ctgccgtgtgaaaagtctgacgcatacttcgtgctgcgtgacggtgctgcgggcgtgttc
ctcgccgccaacaccttcccgaaatcgcgtgaaacccgtgcgccgctggtggaagagctg
taccgcttccgcgaccgtctgccagagaaactgcgttatctggccgatgcgccgcagcag
gatccggaaggcaataaaaccgttgtccgctttagccgtaaaacaaagcagcagtacgtc
gctgccgagaaagagggtaaagcgaccggctggtctgcattcttcgtggatggtaaatgg
gttgaaggcaagaaataa
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