Lelliottia sp. WB101: DAI21_19175
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Entry
DAI21_19175 CDS
T05398
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
lew
Lelliottia sp. WB101
Brite
KEGG Orthology (KO) [BR:
lew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lew03032
]
DAI21_19175 (ihfB)
03036 Chromosome and associated proteins [BR:
lew03036
]
DAI21_19175 (ihfB)
03400 DNA repair and recombination proteins [BR:
lew03400
]
DAI21_19175 (ihfB)
DNA replication proteins [BR:
lew03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DAI21_19175 (ihfB)
Chromosome and associated proteins [BR:
lew03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DAI21_19175 (ihfB)
DNA repair and recombination proteins [BR:
lew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DAI21_19175 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HAAS
HU-CCDC81_euk_1
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
AVY99624
LinkDB
All DBs
Position
complement(3937821..3938108)
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AA seq
95 aa
AA seq
DB search
MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVDLEGKYVPHFKPGKELRDRANIYGN
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcagaattgattgaaagacttgccagccaacaatcgcacatccccgcaaaa
gcagtggaagatgcagtgaaagagatgctagagcatatggcctcgactcttgcacaaggc
gagcgcattgaaatccgcggtttcggtagtttctctctgcattatcgtgctccacgaacc
gggcgtaacccgaagactggcgataaagtcgacctggaaggcaaatacgttccgcacttt
aagccgggtaaagaactgcgcgatcgcgccaatatttacggaaactga
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