Lelliottia sp. WB101: DAI21_21875
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Entry
DAI21_21875 CDS
T05398
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lew
Lelliottia sp. WB101
Brite
KEGG Orthology (KO) [BR:
lew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lew03400
]
DAI21_21875
DNA repair and recombination proteins [BR:
lew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DAI21_21875
Archaeal homologous recombinant proteins
DAI21_21875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_15
MG280
nSTAND3
AAA_21
ABC_tran
BTD
MobB
cobW
GRIM-19
ABC_ATPase
DUF4037
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVZ00109
LinkDB
All DBs
Position
4517869..4521006
Genome browser
AA seq
1045 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGATGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGVTYRAFWSQNRARNQPDGNLQAPRVELARCE
DGKILADKVKDKLDLTASLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGQISAMVFEKHKTARTELEMREAQAAGVVLLSEEQQQQLHQGLQALTDEEKTLLSEQQ
NRQAQHQWLVRSEELAREQLRAQSAHQQALQAQADAQPELLKLQQAQPALALRPLWDRQQ
EQASTLALTQQQIAEVNTRLLSRKGQRARIRNGAMREAERLQSQHKSLASWIDEHSHFGL
LSQHIGGWRALFTQQQRDKSQAVALGKRLTELQQKLAALPLTSLTLSAEETAQALEHQVQ
YRPTRQRLATLHARYQPLQKRLLQMRATQEKDLAAQATLDQTLAARRQQYKEKNQHYLDL
KTLCEQEALIKGLEAHRASLEAGKPCPLCGATEHPAVAQYQALEVSANQRRRDELHAEVK
RLEEEGLLLRGQLKALIDQREREIAETLTISQEEQALTQEWQSVCASLKASLNIQEDIAP
WLEEQEQYERQLYQLSQRLALQNQLNELEQQIHQIQQQVDTQRQTLLSALMPLALTAPQE
GEESAWLALRETESNEWQEKQKQLTALQEQMNALMPLLDTLPASEDETADEPVPDNWRDI
HNDCISLQSQLATLQQQEQSDRERLAQLQTQFATALQESSFASEAAFLSALLDGDTVRKL
EQLKHTLEQQLQQSSALALQADQQRLEHMEKQPEALPEDLDVQALQAQLQQLAQQLRENT
TRQGEIRQQLKQDSDNRLHQQGLMQQIEEAARLADDWGYLNALIGSSTGDRFRKFAQGLT
LDNLVWLANQQLNRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLAL
ALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNATGKTIGVISHVEAMKER
IPVQIKVKKINGLGYSKLDRAFAVE
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgtctgaaaaacctcaactccctgaagggcgagtggaaaatc
gacttcaccgccgagccgtttgccagcaacggcctgtttgctataacgggcgcgaccggt
gcgggtaaaacgaccctgctcgatgccatctgcctggcgctgtaccacgagacgccgcgt
ctgaacacggtgtcgcaatcgcaaaacgatctcatgacccgcgacacggcggagtgcctc
gccgaagtggagttcgaagtgaaaggcgtgacctatcgcgcattctggagccagaaccgc
gcccgtaaccagccggacgggaacttacaggcaccgcgcgtggagcttgcccggtgcgaa
gacggcaaaattctcgccgataaggtgaaagataaactcgatcttaccgcctccctgacc
gggctggattatggccgtttcacccgttcgatgcttctttcccaggggcagttcgcggcg
tttttaaatgcaaaacccaaagagcgcgccgagctgctggaagagctgaccggcaccgag
atctacggccaaatctccgccatggtgtttgaaaaacacaaaacggcaagaaccgagctg
gagatgcgcgaagcgcaggcggcaggcgtggtgctactgagcgaagaacagcaacagcag
ctccatcagggtttgcaagcactgactgacgaagaaaaaacgctgctcagtgaacagcaa
aaccgccaggcacaacatcagtggctggtgcgcagcgaagagctggcgcgtgaacagcta
cgtgcgcaatcggcacatcaacaggcgttacaggcacaggccgacgcccaaccggaactg
cttaaactgcagcaggcacaacctgcgctggcgctgcgcccgctctgggaccgtcagcag
gagcaggcgtcaacgctcgccctcacgcagcagcagattgccgaagtaaatactcgctta
ctttcacgcaaggggcagcgggcacggatccgtaacggcgcaatgcgtgaggcagagcgg
ctccagtcacagcacaaatcgctcgccagctggatcgacgaacacagccacttcgggctg
ttgagccagcacattggcggctggcgtgcgttatttacccagcagcagcgggataaatct
caggcagtggcgctgggtaagcgtctgactgaactgcaacaaaaactggccgcgctgccg
ctcacttcactgacgctatccgcagaagagaccgcgcaggcgttagagcatcaggtccag
tatcgcccgacgcgtcagcgtctcgccacactgcatgcccgctatcagccgctgcaaaaa
cggctgttacagatgcgggcaacgcaggaaaaagacctggccgcgcaggccacgcttgat
caaaccctggctgcgcgacgccagcagtacaaagagaaaaaccagcactatctggatttg
aaaaccctgtgcgaacaggaagcgctaatcaagggtctggaggcgcaccgcgccagcctc
gaggcgggtaaaccctgcccgctgtgcggtgcaaccgaacatcctgccgtggcgcagtat
caggcgctggaggttagcgctaaccaacgtcgccgcgatgaactgcacgccgaagtgaaa
cggcttgaagaagagggactgttgctgcgcggacagctgaaagcgctgatagaccagcgt
gagcgcgaaatcgcagagaccctgacgatcagtcaggaggagcaagcgctcacacaggag
tggcagtcggtgtgcgcgtcactgaaggcgagcctgaacattcaggaagatattgccccc
tggctggaggagcaggagcagtacgagcgccagctgtatcagctcagccaacgcctggcc
ttgcagaatcagctcaacgaactggaacagcagattcaccagattcagcagcaggttgat
acccagcgccagaccttgctgagcgcattaatgccgctcgctctcaccgcgccgcaagag
ggcgaagagagcgcgtggctggcactgcgtgaaaccgaatcgaatgagtggcaggaaaaa
cagaagcagctcacggcccttcaggaacaaatgaacgccctgatgccgcttctcgacacg
ctgcccgcatccgaagatgaaacggcggacgagccggtccccgacaactggcgcgatatt
cacaacgactgcatctccctgcaaagccagctcgccaccctgcaacagcaggagcagagc
gatcgcgagcgtctggcacagctgcaaacccagtttgctactgcgcttcaggagagcagt
tttgccagtgaagccgcgttcctttccgcactgcttgatggcgataccgtgcgcaagctg
gaacagctgaaacacacgctggaacaacagctccagcaatcctctgcgctggccttacag
gcggatcagcagcgtctggagcatatggaaaagcaaccggaagcgctgccggaggatttg
gacgtacaggcattgcaggcgcaattacagcaactggcacagcagctacgcgaaaatacg
acgcgtcagggcgagatccgccagcagctgaagcaggacagcgataaccgtcttcatcag
cagggcttgatgcagcagattgaagaggccgcgcgtcttgcggatgactggggatatctg
aacgcgctgatcggttccagtaccggcgaccggttccgtaaatttgcccaggggttgacc
ctcgacaatctggtgtggctggccaaccagcagctcaaccgcctgcacgggcgctatctg
ctgcaacgcaaggccagcgatgcgctggagctggaagtggtcgatacctggcaggccgac
gccgtgcgcgatacgcgcaccctctccggcggggagagtttcctggtaagccttgcgctg
gcgctggcgctgtcagatctggtgagccataaaacgcgaatagattccctgttccttgat
gagggctttggtacgctggacagcgaaacgctggatacggcgctcgatgcgctcgatgcc
ctgaacgccacgggcaaaaccatcggcgtcatcagccatgtcgaggcgatgaaagagcgc
ataccggtgcagatcaaagtgaagaaaattaacgggctgggctacagcaagttagacaga
gcctttgcggtggagtaa
DBGET
integrated database retrieval system
