Entry |
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Symbol |
addB
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Name |
(GenBank) helicase-exonuclease AddAB subunit AddB
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KO |
K16899 | ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] |
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Organism |
lex Lentibacillus sp. CBA3610
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Brite |
KEGG Orthology (KO) [BR:lex00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:lex03400]
Len3610_01900 (addB)
Enzymes [BR:lex01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Len3610_01900 (addB)
DNA repair and recombination proteins [BR:lex03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Len3610_01900 (addB)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
364788..368276
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AA seq |
1162 aa
MGVQFLLGRAGTGKSEWILNEIRNKLTDNPQGPPIFYIVPEQMTFQQEYALFQDEIKGSI
RAQVVSFSRLSWRVLQETGGATRQFITSVGTQMMLRKIIAEKESEWNIFQKALEKQGFLE
QLESMITEFKRYLITPEMLYMQIDQMEQFVHKEPGEEALTGKLNDLAYIYENLMRVLEGN
YIDSEDQLQMLADKIKDAPLLKDAAIYLDGFHRFSPKERLVVEELMKKCHSVTVALTTDI
PDDDALSELDLFYQTKETYYALQTIAKDHGIPINEPVLLNPEDGRLGDRPYFAHLEKHFD
VRPAPVYNGEVPIQIAEAVHPRAEVEGVAQEILRLVREEHYRFQDIAVFIRQTDVYHDLI
DTIFNDYDIPVFIDEKRSMLNHSLIEFIRSVMDIVAGNWRYDAVFRVLKTGFIPVSDSKY
PLNDDAIDELENYVLEYGIRSRTQWLSDDEWVFQRFLGFDRSGQTDAEKETQKRINAYRY
QVAKGLKAFDEDIRQAETVRERCEIIYMLLEELDVPGRLEKMRETYDNQGQLEKAREQEQ
VWNAVIQLFDEMVEMAGDETMTMETFRAAIDAGFESMTFAHVPPSIDHVIVGTIDRSRIS
GVKCSFLLGVNEGTWPMNQAEDGMINEQERNTLAEHGIQLAESSKRQLLDDWFYMYLAFT
SANDYLWVSYPLSDEEGKSKMPSQLIKRMEDLFPECSDHMLLQEPDELVDAERFITTPIK
TRAALTAQLARHRKGYPIKKVWWYVLDWYIHNHPKYSTTYTILQSLYYQNQPVNLTKQTT
EELYPKQVKASVSRLESYYRCSYQHFAQYSLQLQERKTYKLDAPDIGQLFHEALKKITEW
IQAEGRDFSHLTKQESAGYARQAVENLAPVLQHQILHSSNRYKYIQQKLQDVITRATYIL
SEQARKSDFSPVGLELGFGDKQTLNPVTLQLPNGYELMLRGRIDRVDKAESAEGLFLRII
DYKSSEKGLDLLEVYYGLALQMLTYLDVVLSQSEQWLGVKATPAGVLYFHVHNPMISGNM
NMSDDEIEKELFKKYKMQGMLLSDEEIVKLMDTSLESGRSQIIPAGVKKNGGFYSGSRIA
DQETFQSLQNHIHHLMMQAGIDMTSGGVHLNPFQHKQQTACTFCPFRSVCQFDPSLEENN
YRKLTDMKDEEILEKLRIREES |
NT seq |
3489 nt +upstreamnt +downstreamnt
atgggcgtgcaatttttattaggaagagccggaaccggtaaaagtgagtggattttaaat
gagatccggaataagttgaccgataacccgcaaggaccgccaatcttttatatcgttccg
gagcaaatgacgtttcagcaggaatatgcattatttcaggatgagatcaaaggaagtatc
cgtgctcaggttgtcagtttttcacgtttgtcatggcgcgtgctgcaagaaaccggtggt
gctacaaggcaatttatcacctcggtcggtacccagatgatgcttcgtaaaattattgcg
gagaaagaaagtgaatggaatatttttcaaaaggctttggagaagcaagggtttctggaa
cagctcgagagcatgatcactgagttcaaacgttaccttatcaccccggaaatgctctat
atgcaaatcgaccaaatggagcaatttgtacataaagagcctggtgaagaagcattaacg
ggtaaattaaatgatctggcttatatctatgaaaatttaatgcgtgttctggaaggtaac
tatattgatagtgaagatcagctgcagatgcttgctgataaaataaaggatgcgccattg
ttaaaggatgcggctatttatctggacgggtttcaccggttttccccgaaggaacgcctt
gttgtcgaggagctgatgaaaaaatgtcattcagtgacggttgcattgacaacagatatt
ccggatgacgatgcgctttccgaactggatttgttttaccagacaaaagaaacctattat
gcattgcaaacaatcgctaaggatcatggtatcccaatcaatgaaccagttctattgaac
ccggaagatggcaggctgggtgatcggccgtattttgcacatttggaaaagcattttgat
gttagacctgcccctgtgtataacggtgaagtccctatccaaatagctgaagcagtccac
ccgcgtgcagaagtggaaggagtggctcaggaaatactccgattggtgagagaagagcat
taccgttttcaggatatagctgtattcatccggcagaccgatgtctatcatgatttgatc
gatacgattttcaatgattatgatatcccggtttttatcgatgaaaaacgcagtatgctg
aaccattcactgatcgaatttattcgttccgtcatggatatcgtcgcgggaaattggcgt
tatgatgcggtgtttcgcgtattaaagaccggatttatcccggtgtctgactcaaagtat
ccgctcaacgatgatgcgattgatgagctcgagaattatgtacttgagtatgggattcgg
tcacgtacgcagtggctcagtgatgacgaatgggtgttccagcggtttctcggttttgac
cgatcaggacagacggatgcagaaaaagaaacccaaaaacggatcaatgcgtaccgatat
caagttgcgaagggcttaaaggcatttgatgaagatatcagacaggccgaaacggtgcgt
gaacgatgcgaaatcatttatatgctgctggaggagctcgatgtacccggcaggctcgag
aaaatgcgggaaacatacgataaccaaggtcaactggaaaaggcacgggaacaggaacaa
gtgtggaatgccgtcattcagttgtttgatgagatggttgaaatggccggagacgagacg
atgacgatggaaacattccgcgctgccattgatgccggtttcgagtcgatgacatttgca
catgtaccgccaagcattgatcatgtgattgtcggtacgattgatcgctcccggataagc
ggcgtgaagtgttcgtttttacttggtgtgaatgaaggcacatggccgatgaatcaggca
gaagatggcatgatcaatgaacaagaacgaaacaccctggcagagcatgggatccagctg
gccgaaagcagcaagcgacagcttttggatgactggttttatatgtatctcgcgtttacc
tcggcaaatgactatttatgggtcagttacccgttgagtgatgaagaaggcaaatcaaaa
atgccatcacagctcattaagcgaatggaggacttattccctgaatgctctgatcatatg
ttattgcaggaacctgatgagctggttgatgctgagcggttcattaccacgccaatcaag
acaagggcagcgctgacggcccagttggcgcgccaccggaaagggtatccgattaagaag
gtctggtggtatgtcctggattggtatattcataaccatccaaaatacagcacgacttat
accattttgcaaagcctgtattatcagaatcagccggttaacctgacaaaacaaacaact
gaagagctttacccgaaacaggttaaagcaagtgtatcaaggcttgagtcctattatcgc
tgttcctatcagcattttgcccagtatagtctgcagcttcaggaacgaaaaacgtacaag
cttgatgcaccggatattggtcagctttttcatgaagcattgaaaaaaatcaccgaatgg
atccaagcggagggccgggatttttcccacttaacaaaacaggaaagtgcaggttatgcc
cggcaggctgtggagaatcttgcccctgttctgcagcaccaaatcctgcacagttccaac
cgttataaatatattcagcaaaaattgcaggatgttataacaagagcaacctatattcta
agtgaacaggcccgaaagagtgacttctcaccggttggactcgaacttggatttggtgat
aaacagacgcttaatccggttacactgcagctgccaaatgggtatgaactgatgctcagg
ggacggattgaccgtgtcgataaagcggaaagtgccgaggggttatttttacggatcatt
gactataaatcgagtgaaaaaggactcgatcttttggaagtgtattacgggctggcactt
cagatgctgacgtacttggatgtcgtgctctcccagtctgaacaatggctcggagtgaag
gcaaccccggccggtgtcctttattttcatgtgcacaatccgatgatttcaggaaacatg
aacatgtctgatgatgagattgaaaaagaattatttaaaaagtataagatgcaggggatg
ctgctgtcggatgaagagattgtcaaactgatggatacatcgctcgaatcaggcaggagt
caaattatccctgccggtgtgaaaaagaatgggggattctatagcggctccaggattgct
gaccaggaaacattccaaagcctgcaaaatcacattcaccacttaatgatgcaagcggga
atcgatatgacatcgggtggtgtgcatttgaatccatttcagcataaacagcaaacggcg
tgcaccttctgcccgtttcgatccgtttgtcagtttgacccgagtcttgaggagaataac
taccgcaagctgacagatatgaaagatgaggaaattctggaaaagctccgtataagggag
gaatcataa |